suba logo
AT5G41410.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : POX (plant homeobox) family protein
Curator
Summary (TAIR10)
Homeodomain protein required for ovule identity.Loss of function mutations show homeotic conversion of integuments to carpels.Forms heterodimers with STM and KNAT1. Interacts with AG-SEP heterodimers is thought to restrict WUS expression. BEL interacts with MADS box dimers composed of SEP1(or SEP3) and AG, SHP1, SHP2 and STK. The interaction of BEL1 with AG-SEP3 is required for proper integument development and specification of integument identity.
Computational
Description (TAIR10)
BELL 1 (BEL1); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 4 (TAIR:AT2G23760.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioGrid:19394eggNOG:ENOG410XPMQeggNOG:KOG0773EMBL:AB006707EMBL:AY049237EMBL:AY054513EMBL:BT002637
EMBL:CP002688EMBL:U39944EnsemblPlants:AT5G41410EnsemblPlants:AT5G41410.1entrez:834143Gene3D:1.10.10.60GeneID:834143
Genevisible:Q38897GO:GO:0003677GO:GO:0003700GO:GO:0005634GO:GO:0005829GO:GO:0006351GO:GO:0009506
Gramene:AT5G41410.1hmmpanther:PTHR11850hmmpanther:PTHR11850:SF120HOGENOM:HOG000239679InParanoid:Q38897IntAct:Q38897InterPro:IPR001356
InterPro:IPR006563InterPro:IPR008422InterPro:IPR009057iPTMnet:Q38897KEGG:ath:AT5G41410ncoils:CoilOMA:MEITNPM
PaxDb:Q38897Pfam:PF05920Pfam:PF07526Pfam:Q38897Pfscan:PS50071PhylomeDB:Q38897PIR:A57632
PRIDE:Q38897PRO:PR:Q38897PROSITE:PS00027PROSITE:PS50071ProteinModelPortal:Q38897Proteomes:UP000006548RefSeq:NP_198957.1
SMART:SM00389SMART:SM00574SMR:Q38897STRING:3702.AT5G41410.1SUPFAM:SSF46689TAIR:AT5G41410tair10-symbols:BEL1
UniGene:At.24568UniProt:Q38897
Coordinates (TAIR10) chr5:+:16580424..16583770
Molecular Weight (calculated) 69497.30 Da
IEP (calculated) 6.97
GRAVY (calculated) -0.89
Length 611 amino acids
Sequence (TAIR10)
(BLAST)
001: MARDQFYGHN NHHHQEQQHQ MINQIQGFDE TNQNPTDHHH YNHQIFGSNS NMGMMIDFSK QQQIRMTSGS DHHHHHHQTS GGTDQNQLLE DSSSAMRLCN
101: VNNDFPSEVN DERPPQRPSQ GLSLSLSSSN PTSISLQSFE LRPQQQQQQG YSGNKSTQHQ NLQHTQMMMM MMNSHHQNNN NNNHQHHNHH QFQIGSSKYL
201: SPAQELLSEF CSLGVKESDE EVMMMKHKKK QKGKQQEEWD TSHHSNNDQH DQSATTSSKK HVPPLHSLEF MELQKRKAKL LSMLEELKRR YGHYREQMRV
301: AAAAFEAAVG LGGAEIYTAL ASRAMSRHFR CLKDGLVGQI QATSQALGER EEDNRAVSIA ARGETPRLRL LDQALRQQKS YRQMTLVDAH PWRPQRGLPE
401: RAVTTLRAWL FEHFLHPYPS DVDKHILARQ TGLSRSQVSN WFINARVRLW KPMIEEMYCE ETRSEQMEIT NPMMIDTKPD PDQLIRVEPE SLSSIVTNPT
501: SKSGHNSTHG TMSLGSTFDF SLYGNQAVTY AGEGGPRGDV SLTLGLQRND GNGGVSLALS PVTAQGGQLF YGRDHIEEGP VQYSASMLDD DQVQNLPYRN
601: LMGAQLLHDI V
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)