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AT5G41210.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27943495 (2017): mitochondrion
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:24130194 (2013): peroxisome
  • PMID:19329564 (2009): peroxisome
  • PMID:18931141 (2008): peroxisome
  • PMID:17951448 (2007): peroxisome
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : glutathione S-transferase THETA 1
Curator
Summary (TAIR10)
Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002).
Computational
Description (TAIR10)
glutathione S-transferase THETA 1 (GSTT1); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: toxin catabolic process; LOCATED IN: peroxisome, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase THETA 3 (TAIR:AT5G41220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G41210-MONOMERBioGrid:19374DNASU:834123EC:2.5.1.18eggNOG:COG0625eggNOG:KOG0867EMBL:AB010072
EMBL:AJ131580EMBL:AY054659EMBL:AY072466EMBL:CP002688EnsemblPlants:AT5G41210EnsemblPlants:AT5G41210.1entrez:834123
Gene3D:1.20.1050.10Gene3D:3.40.30.10GeneID:834123Genevisible:Q9ZRT5GO:GO:0004364GO:GO:0004601GO:GO:0005634
GO:GO:0005737GO:GO:0005777GO:GO:0006749GO:GO:0009407Gramene:AT5G41210.1hmmpanther:PTHR11260hmmpanther:PTHR11260:SF220
HOGENOM:HOG000125747InParanoid:Q9ZRT5IntAct:Q9ZRT5InterPro:IPR004045InterPro:IPR010987InterPro:IPR012336KEGG:ath:AT5G41210
KO:K00799OMA:EVHELLFPaxDb:Q9ZRT5Pfam:PF02798Pfam:PF14497Pfam:Q9ZRT5Pfscan:PS50404
Pfscan:PS50405PhylomeDB:Q9ZRT5PIR:T51594PRIDE:Q9ZRT5PRO:PR:Q9ZRT5PROSITE:PS50404PROSITE:PS50405
ProteinModelPortal:Q9ZRT5Proteomes:UP000006548Reactome:R-ATH-156590RefSeq:NP_198937.1SMR:Q9ZRT5STRING:3702.AT5G41210.1SUPFAM:SSF47616
SUPFAM:SSF52833TAIR:AT5G41210tair10-symbols:ATGSTT1tair10-symbols:GST10tair10-symbols:GSTT1UniGene:At.24905UniProt:Q9ZRT5
Coordinates (TAIR10) chr5:-:16492550..16493884
Molecular Weight (calculated) 27654.90 Da
IEP (calculated) 10.12
GRAVY (calculated) -0.20
Length 245 amino acids
Sequence (TAIR10)
(BLAST)
001: MMKLKVYADR MSQPSRAVII FCKVNGIQFD EVLISLAKRQ QLSPEFKDIN PLGKVPAIVD GRLKLFESHA ILIYLSSAFP SVADHWYPND LSKRAKIHSV
101: LDWHHTNLRR GAAGYVLNSV LGPALGLPLN PKAAAEAEQL LTKSLSTLET FWLKGNAKFL LGSNQPSIAD LSLVCELMQL QVLDDKDRLR LLSTHKKVEQ
201: WIENTKKATM PHFDETHEIL FKVKEGFQKR REMGTLSKPG LQSKI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)