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AT5G41180.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.772
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : leucine-rich repeat transmembrane protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G63430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G41180-MONOMEReggNOG:ENOG410IJP0eggNOG:ENOG410YEY6EMBL:AB010072
EMBL:CP002688EMBL:FJ708786EnsemblPlants:AT5G41180EnsemblPlants:AT5G41180.1
entrez:834120Gene3D:3.80.10.10GeneID:834120GO:GO:0004672
GO:GO:0005524GO:GO:0016021Gramene:AT5G41180.1hmmpanther:PTHR27000
hmmpanther:PTHR27000:SF133HOGENOM:HOG000240929InterPro:IPR000719InterPro:IPR001245
InterPro:IPR001611InterPro:IPR011009InterPro:IPR013210InterPro:IPR032675
KEGG:ath:AT5G41180OMA:NAMEHRDPfam:PF07714Pfam:PF08263
Pfam:PF13855Pfscan:PS50011Pfscan:PS51257PhylomeDB:Q9FLL2
PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_198934.1SMR:Q9FLL2
SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT5G41180UniGene:At.30248
UniProt:Q9FLL2
Coordinates (TAIR10) chr5:+:16484045..16487228
Molecular Weight (calculated) 74332.30 Da
IEP (calculated) 8.32
GRAVY (calculated) -0.12
Length 664 amino acids
Sequence (TAIR10)
(BLAST)
001: MRLYLSSTMQ LSLMSLVLGF LFVSCDAFAS KEVEAVRRFK EAIYKDPLLV MSNWNVPNLS PCDWNGIKCS PSKDHIIKIN ISGTSMRGFL VPELGQITYL
101: QELILRGNIL MGTIPKEIGK LKKLKILDLG NNHLTGPIPA EIGKLSRIKT INLQSNGLIG KLPPEIGNLK HLKELLIGRN RLRGSIPIAA KTSKKYASNP
201: SANISGLCKS SLFKVADFSY NFFEGRVPSC LDYLPITSFQ GNCMKTMDVK QRPLSECARL AVTVAKKKHR ASRQTWLRNF EIVTGSSVGL LFLVVMFSAC
301: SLCKIKRSLI VPWKKSASEK EKFTVYVDSE MLKDVSRYTR QELEVACEDF SNIIDSSAES QIYKGTIKGG TEIAVISLCV KEENWTGYLE LNFQREVAAL
401: ARLNHENAGK LLGYCKESTP FTRMLVFEYA SNGTLYDHLH YADGSLVSWA KRMKIVIGIA RGLKYLHTEL HPPFTVSELS STAVYLTEDF TPKLVDFECW
501: KIIQVRSEKN LKNICNEGAI CVLPNAMEHR DMDLQGNIYS FGILLLEIVS GRPSYCQDRG CLVEWVREKN LGAPDVMASL VDPELKHFKQ KELEAVCEVA
601: SQCLNLDQNE KDKDKLSCSI QALCETLESR ITVSISAEFK SSSLAWAELA LASPSNEDDD DRSK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)