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AT5G41040.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.769
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : HXXXD-type acyl-transferase family protein
Curator
Summary (TAIR10)
Encodes a feruloyl-CoA transferase required for suberin synthesis. Has feruloyl-CoA-dependent feruloyl transferase activity towards substrates with a primary alcohol.
Computational
Description (TAIR10)
HXXXD-type acyl-transferase family protein; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G63560.1); Has 2970 Blast hits to 2949 proteins in 200 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 233; Plants - 2727; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G41040-MONOMERBioCyc:ARA:GQT-2161-MONOMEREC:2.3.1.188eggNOG:ENOG410IFZF
eggNOG:ENOG410XYY6EMBL:AB010072EMBL:AY034954EMBL:AY062996
EMBL:CP002688EMBL:GQ176867EnsemblPlants:AT5G41040EnsemblPlants:AT5G41040.1
entrez:834106ExpressionAtlas:Q94CD1Gene3D:3.30.559.10GeneID:834106
Genevisible:Q94CD1GO:GO:0010345GO:GO:0050734GO:GO:0052325
gramene_pathway:2.3.1.133gramene_pathway:PWY-361gramene_pathway:PWY-5868hmmpanther:PTHR31642
hmmpanther:PTHR31642:SF43HOGENOM:HOG000237410InParanoid:Q94CD1InterPro:IPR003480
InterPro:IPR023213KEGG:ath:AT5G41040KO:K15400OMA:ANCKMDE
PaxDb:Q94CD1Pfam:PF02458Pfam:Q94CD1PhylomeDB:Q94CD1
PRIDE:Q94CD1PRO:PR:Q94CD1ProteinModelPortal:Q94CD1Proteomes:UP000006548
RefSeq:NP_568587.2RefSeq:NP_851111.1SMR:Q94CD1STRING:3702.AT5G41040.1
TAIR:AT5G41040UniGene:At.6590UniGene:At.75217UniProt:Q94CD1
Coordinates (TAIR10) chr5:+:16431448..16433086
Molecular Weight (calculated) 50960.30 Da
IEP (calculated) 5.56
GRAVY (calculated) -0.19
Length 457 amino acids
Sequence (TAIR10)
(BLAST)
001: MVAENNKNKD VTLSASMDNN NNNIKGTNIH LEVHQKEPAL VKPESETRKG LYFLSNLDQN IAVIVRTIYC FKSEERGNEE AVQVIKKALS QVLVHYYPLA
101: GRLTISPEGK LTVDCTEEGV VFVEAEANCK MDEIGDITKP DPETLGKLVY DVVDAKNILE IPPVTAQVTK FKCGGFVLGL CMNHCMFDGI GAMEFVNSWG
201: QVARGLPLTT PPFSDRTILN ARNPPKIENL HQEFEEIEDK SNINSLYTKE PTLYRSFCFD PEKIKKLKLQ ATENSESLLG NSCTSFEALS AFVWRARTKS
301: LKMLSDQKTK LLFAVDGRAK FEPQLPKGYF GNGIVLTNSI CEAGELIEKP LSFAVGLVRE AIKMVTDGYM RSAIDYFEVT RARPSLSSTL LITTWSRLGF
401: HTTDFGWGEP ILSGPVALPE KEVTLFLSHG EQRRSINVLL GLPATAMDVF QEQFLQI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)