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AT5G40450.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.990
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JHZQeggNOG:ENOG410ZD5QEMBL:CP002688EnsemblPlants:AT5G40450EnsemblPlants:AT5G40450.1entrez:834043GeneID:834043
Gramene:AT5G40450.1hmmpanther:PTHR35511InParanoid:F4KHD5iPTMnet:F4KHD5KEGG:ath:AT5G40450ncoils:CoilOMA:EPCSSEI
PaxDb:F4KHD5PRIDE:F4KHD5ProteinModelPortal:F4KHD5Proteomes:UP000006548RefSeq:NP_198861.4STRING:3702.AT5G40450.1TAIR:AT5G40450
UniGene:At.21737UniProt:F4KHD5
Coordinates (TAIR10) chr5:-:16184799..16195513
Molecular Weight (calculated) 323022.00 Da
IEP (calculated) 3.94
GRAVY (calculated) -1.09
Length 2889 amino acids
Sequence (TAIR10)
(BLAST)
0001: METGVVTIQE PVSTKTDVGG VPAEVILEKS SMEVQKVNLS TVLDDEITSG ADRGNNIITG EADVAEVVNG SGDKETEELK RENGEATKTI SVLDDSKIVK
0101: DDQESIVVRE PQSLNEKKED EKIILSDVTL ENKKEEDTTG KPEEVSVEKP VIEEDQTEAK HSLEQEEDIG NISKVCEEIP IKTDEVREET DSRTVETSVN
0201: GTEAEHNATV SVEEISRNGD NTVNETVSED QTATDGEPLH DVETIKREAE PFYKTVVEDA KIVNTEETTA HESKILKEDN HQEEYAESVE ATKNSDAAEQ
0301: SSREVTVDKE KEEDIIQNIE EVQESPSVME SPTIQGEDIE SKASLDHEEE MDKITKDTEE QEHVLVRDVP VPQSETLVTE AKTAETFSVQ EAEILKTNIN
0401: ESEAHSAIGG EEDGQETKEN TEPSKDLKDD KEQEDSETVK TIISSDEVRS SDVQAEVFGE HTEPCSSEIK DDRHGRDESI EVKAKETGPE IETAVDGESV
0501: HEIETTERVL LEAEKEEDKE EIKIDEEPSL NAIEKAETEN VKIVIEEPEI VNNEETSVHE SESLKENAEP VEAVKNSDGT EQISREVTVD RAKEEDIAPK
0601: TEEIQERPSE SKASLEPKEE VDHISNETEE HEHVLERDVQ QCETIESEAV ETKEDTQPSL DLKEDKETEE AETFKTVFSS DEVRSSAVQE EQFGEHTEPC
0701: SSEIKDESHG KEESVEVKSQ ETVQDENTED KHDVLKVPST ESEKYQGNEP ETVLVSNTGS YEKSEKSPSD LVLNVDKEEL NDEKINVDQV DGTQIMEEPI
0801: GLDSNGAEAE QIDQNITNET EEILVAKPVS LLDVKSVEQM QKPKLESPSE VSEETSKTVD EKIEEKPEEE VTLYQEGQVD GSYGLETKEE TVSVPESIEL
0901: EEQPQEERSV IDPTPLQKPT LESPSEVLEE SSKTVDEKIE EKTDSIELGE IAQEERSVTD LTPLQEESSQ PNEQEKETKL EKHEPTNEEV KSDEVIEVLS
1001: ASPSKELEGE TVVEAENIEN IKENEEEQAA EKIQKSLETV QTVESPSSLL FSSEEQDHVT VAEEIVDEKA KEEVPMLQIK NEDDATKIHE TRVEQARDIG
1101: PSLTEICSIN QNQPEEQVKE ACSKEEQEKE ISTNSENIVN ETYALHSVEA AEEETATNGE SLDDVETTKS VLLEVRKEEE EAEMKTDAEP RLDAIEKEEL
1201: ETVKTVVQDA KIVNNEETTA HESESLKGDN HQEKNAEPVE ATQNLDDAEQ ISREVTVDTE READITEKIE KVQEGPTVIE TPTIQGEDIE SETSLELKEE
1301: VDQSSKDTEE HEHVLERDIP QCETLKAEAV DTSTVEEAAI LKTLETNISE PEAMHSETSL DLKVDKEQKE AETVKTVIFS NEVGTSDAQA EEFGEHTEPC
1401: SSEIKDESQG SEESVEVKSK ETVQGESSEE KDVNMLDVQS GESEKYQENE PDISLVSKTE NGDKFEEIPS VVEGAGLDET THNQTLLDVE SVVKQSLDTP
1501: SEEETSKTID EKIEDKPKEE VTLHQEGREE GSYGLDTKDE AVSVLESREL GEQPQQEELC LANEQENETK LQEEQVDKHE PTKEEVSNDQ QSPVEEISNE
1601: VIQVSSASLS EGPEYETVVE AEKIGEEQVA DKIQKSFETG EIVEAHSSLP SSSEEKEHET VSEKTDDEKV KDAEPIGDMR ERGLDIAETT HLSLPSVDQK
1701: EDVDEIHIPS VALPLDEQEK VTSTEKGETK SSEAEDDKPD EHVDSSTSPM LSEKNDNETQ TSKTSEDVCM QQEESGTLEV PKPEESKEDK SQEISETIEE
1801: IEATSDQTLP IETSHTDNTL SSELVSEQDD QSPKKVEEIH EEEPKEAHDV EATSERNLPV ETSDADNTLS SQLVSETKEE HKLQAGEILP TEIIPRESSD
1901: EALVSMLASR EDDKVALQED NCADDVRETN DIQEERSISV ETEESVGETK PKEHEDEIRD AHVETPTAPI ILEENDSETL IAEAKKGNEE INETERTVAL
2001: DHEEEFVNHE APKLEETKDE KSQEIPETAK ATETTIDQTL PIGTSQADQT PSLVSDKDDQ TPKQVEEILE EETKETHKVQ AEDIFSTETV PKESFIEAPV
2101: SMLASGEDEP VTPQEGDYAA NTQEERHVSA ETEEKVGETK PKESQAEGAE KSDDQVEDES TKKTDVEVAG LENDYPTEEA EHGDETYSTL PVVGILTQLQ
2201: TTLETERAIN DSASSEVSMI KEPADQEEKK GDDVVESNEK DFVSDILEAK RLHGDKSGEA EKIKEESGLA GKSLPIEEIN LQEEHKEEVK VQEETREIAQ
2301: VLPREEILIS SSPLSAEEQE HVISDEKQEE REPQQDFNGS TSEKISLQVE HLKDFETSKK EQKDETHETV KEEDQIVDIK DKKKDDEEQE IVSSEVKKDN
2401: KDARELEVGN DFVSRDGEKE EVPHNALENE EEMNEVVASE KQISDPVGVI KKASEAEHED PVDDIKSNDD RDFPTEQAPK DQSDEVSADE TVPKEAIGEE
2501: LKVPSSKVLD DIQENSNTEA VTNFADRDLP VQNLSELIQS HQSPNQVEET SFEFNKAQED KKEETVDALI TNVQVQDQPK EDFEAAAIEK EISEQEHKLN
2601: DLTDVQEDIG TYVKVQVPDD EIKGDGHDSV AAQKEETSSI EEKREVEHVK AEMEDAIKHE VSVEEKNNTS ENIDHEAAKE IEQEEGKQTN IVKEEIREEE
2701: KEINQESFNN VKETDDAIDK TQPEIRDIES LSSVSKTQDK PEPEYEVPNQ QKREITNEVP SLENSKIEEE LQKKDEESEN TKDLFSVVKE TEPTLKEPAR
2801: KSLSDHIQKE PKTEEDENDD EDHEHKDDKT SPDSIVMVEA KDTVSIVKTH KKSHGILSGV GSKVKHSISK VKKVLTGKSS HTTKPSSPT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)