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AT5G40440.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.855
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : mitogen-activated protein kinase kinase 3
Curator
Summary (TAIR10)
encodes a mitogen-activated protein kinase kinase
Computational
Description (TAIR10)
mitogen-activated protein kinase kinase 3 (MKK3); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAP kinase kinase 6 (TAIR:AT5G56580.1); Has 122843 Blast hits to 121436 proteins in 4056 species: Archae - 133; Bacteria - 13736; Metazoa - 45702; Fungi - 12099; Plants - 30883; Viruses - 510; Other Eukaryotes - 19780 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G40440-MONOMERBioGrid:19293EC:2.7.12.2eggNOG:ENOG410XQ5AeggNOG:KOG0581EMBL:AB006702EMBL:AB015314
EMBL:AK117136EMBL:BT006481EMBL:CP002688EnsemblPlants:AT5G40440EnsemblPlants:AT5G40440.1entrez:834042Gene3D:3.10.450.50
GeneID:834042Genevisible:O80396GO:GO:0000165GO:GO:0000187GO:GO:0004707GO:GO:0004708GO:GO:0005524
GO:GO:0005737GO:GO:0007346GO:GO:0009814GO:GO:0009864GO:GO:0009866GO:GO:0031098Gramene:AT5G40440.1
hmmpanther:PTHR24361hmmpanther:PTHR24361:SF408HOGENOM:HOG000234206InParanoid:O80396IntAct:O80396InterPro:IPR000719InterPro:IPR008271
InterPro:IPR011009InterPro:IPR017441InterPro:IPR018222InterPro:IPR032710iPTMnet:O80396KEGG:ath:AT5G40440OMA:CASHEMR
PaxDb:O80396Pfam:O80396Pfam:PF00069Pfscan:PS50011Pfscan:PS50177PhylomeDB:O80396PIR:T51338
PRIDE:O80396PRO:PR:O80396PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011PROSITE:PS50177ProteinModelPortal:O80396
Proteomes:UP000006548RefSeq:NP_198860.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:O80396STRING:3702.AT5G40440.1
SUPFAM:SSF54427SUPFAM:SSF56112TAIR:AT5G40440tair10-symbols:ATMKK3tair10-symbols:MKK3UniGene:At.350UniProt:O80396
Coordinates (TAIR10) chr5:+:16182149..16184513
Molecular Weight (calculated) 57532.50 Da
IEP (calculated) 5.55
GRAVY (calculated) -0.15
Length 520 amino acids
Sequence (TAIR10)
(BLAST)
001: MAALEELKKK LSPLFDAEKG FSSSSSLDPN DSYLLSDGGT VNLLSRSYGV YNFNELGLQK CTSSHVDESE SSETTYQCAS HEMRVFGAIG SGASSVVQRA
101: IHIPNHRILA LKKINIFERE KRQQLLTEIR TLCEAPCHEG LVDFHGAFYS PDSGQISIAL EYMNGGSLAD ILKVTKKIPE PVLSSLFHKL LQGLSYLHGV
201: RHLVHRDIKP ANLLINLKGE PKITDFGISA GLENSMAMCA TFVGTVTYMS PERIRNDSYS YPADIWSLGL ALFECGTGEF PYIANEGPVN LMLQILDDPS
301: PTPPKQEFSP EFCSFIDACL QKDPDARPTA DQLLSHPFIT KHEKERVDLA TFVQSIFDPT QRLKDLADML TIHYYSLFDG FDDLWHHAKS LYTETSVFSF
401: SGKHNTGSTE IFSALSDIRN TLTGDLPSEK LVHVVEKLHC KPCGSGGVII RAVGSFIVGN QFLICGDGVQ AEGLPSFKDL GFDVASRRVG RFQEQFVVES
501: GDLIGKYFLA KQELYITNLD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)