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AT5G39400.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.998
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Calcium/lipid-binding (CaLB) phosphatase
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
PTEN1; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Phosphatase tensin type (InterPro:IPR014019), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Tensin phosphatase, C2 domain (InterPro:IPR014020); BEST Arabidopsis thaliana protein match is: PTEN 2 (TAIR:AT3G19420.1); Has 1458 Blast hits to 1454 proteins in 210 species: Archae - 8; Bacteria - 27; Metazoa - 855; Fungi - 236; Plants - 75; Viruses - 0; Other Eukaryotes - 257 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G39400-MONOMEREC:3.1.3.48EC:3.1.3.67eggNOG:COG2453eggNOG:KOG2283EMBL:AB009054EMBL:AJ490172
EMBL:AK118115EMBL:BT005560EMBL:CP002688EnsemblPlants:AT5G39400EnsemblPlants:AT5G39400.1entrez:833936Gene3D:3.90.190.10
GeneID:833936GO:GO:0004725GO:GO:0008138GO:GO:0009555GO:GO:0016314GO:GO:0016791GO:GO:0035335
GO:GO:0046856GO:GO:0052866Gramene:AT5G39400.1hmmpanther:PTHR12305HOGENOM:HOG000152553IntAct:Q9FLZ5InterPro:IPR000008
InterPro:IPR000340InterPro:IPR014020InterPro:IPR016130InterPro:IPR029021InterPro:IPR029023KEGG:ath:AT5G39400KO:K01110
OMA:VIHCMAGPaxDb:Q9FLZ5Pfam:PF00782Pfam:PF10409Pfscan:PS51181Pfscan:PS51182PhylomeDB:Q9FLZ5
PROSITE:PS00383PROSITE:PS51181PROSITE:PS51182Proteomes:UP000006548Reactome:R-ATH-1660499Reactome:R-ATH-1855204Reactome:R-ATH-199418
Reactome:R-ATH-202424RefSeq:NP_198756.2scanprosite:PS00383SMART:SM01326SMR:Q9FLZ5STRING:3702.AT5G39400.1SUPFAM:SSF49562
SUPFAM:SSF52799TAIR:AT5G39400tair10-symbols:ATPTEN1tair10-symbols:PTEN1UniGene:At.30348UniGene:At.49110UniProt:Q9FLZ5
Coordinates (TAIR10) chr5:+:15766251..15767922
Molecular Weight (calculated) 47357.70 Da
IEP (calculated) 7.69
GRAVY (calculated) -0.36
Length 412 amino acids
Sequence (TAIR10)
(BLAST)
001: MGLKLSRGPV KEKSPLEFTR VHILTYFTTN SYLRNLVSKK RRRLIIGGYD LDMSYISDKL LAMSFPAERM RAVYRNPLWQ VKSVLDMRHP DHYKVYNLCI
101: EESYDPDNFY GRVERFPFDD NHVPSLKMIQ LFCESVHSWL SLDPKNIAVV HCMAGKGRTG LMVSAYLVYG GMSAEEALEM YASRRTTNNN GVSIPSQRRY
201: VKYWSDLLSF SKKGPPEVKL PQEHSRELLR IRLYDTANVD SVFFVVSELQ EVPNEMYRPS VELARGCCRQ FKKGYCRSSS PRYYISHVNC DSEEDEEVTD
301: GEEPHLVVQM DTESSIIDEK TCLDFYFDKP VRVSGDIRIT FYQKMIGSRL FYTCFNTAFI TNGLLQFSIG ELDKVGGNGR SISGPDFSLE LLFGPACSKF
401: GKFLSRDDLS LS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)