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AT5G38650.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.500
nucleus 0.500
ASURE: cytosol,nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Proteasome maturation factor UMP1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Proteasome maturation factor UMP1; CONTAINS InterPro DOMAIN/s: Proteasome maturation factor UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana protein match is: acclimation of photosynthesis to environment (TAIR:AT5G38660.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XUI5eggNOG:KOG3061EMBL:AB005231EMBL:AY080752EMBL:AY088167EMBL:AY114011EMBL:CP002688
EnsemblPlants:AT5G38650EnsemblPlants:AT5G38650.1entrez:833855GeneID:833855GO:GO:0000502Gramene:AT5G38650.1hmmpanther:PTHR12828
hmmpanther:PTHR12828:SF3HOGENOM:HOG000005887InterPro:IPR008012KEGG:ath:AT5G38650KO:K11599PANTHER:PTHR12828Pfam:PF05348
PhylomeDB:Q9FFV7Proteomes:UP000006548RefSeq:NP_198681.1STRING:3702.AT5G38650.1TAIR:AT5G38650UniGene:At.30396UniProt:Q9FFV7
Coordinates (TAIR10) chr5:-:15471208..15472699
Molecular Weight (calculated) 15812.00 Da
IEP (calculated) 7.18
GRAVY (calculated) -0.58
Length 141 amino acids
Sequence (TAIR10)
(BLAST)
001: MESQKKIAHE IGGMKNDALR FGLHGVKSDI LRSHPLETAY ESGKQSQEEM KRRVITHTYG AALPLKMDLD RQILSRFQRP PGPIPSSMLG LEVYTGALDN
101: FGFEDYLNDP RESETLKPVD FHHGMEVRLG LSKGPASPSF M
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)