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AT5G38210.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.996
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G38210-MONOMEREC:2.7.11.1eggNOG:COG0515eggNOG:KOG1187EMBL:AB005247EMBL:AY072106EMBL:AY133861
EMBL:CP002688EnsemblPlants:AT5G38210EnsemblPlants:AT5G38210.1entrez:833803GeneID:833803GO:GO:0004674GO:GO:0005524
GO:GO:0005886GO:GO:0016021GO:GO:0046777Gramene:AT5G38210.1hmmpanther:PTHR27005hmmpanther:PTHR27005:SF13HOGENOM:HOG000116550
InterPro:IPR000719InterPro:IPR001245InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441InterPro:IPR032872KEGG:ath:AT5G38210
OMA:CIFIRRRPfam:PF07714Pfam:PF14380Pfscan:PS50011PhylomeDB:Q8VYG0PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_198637.2scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:Q8VYG0
STRING:3702.AT5G38210.1SUPFAM:SSF56112TAIR:AT5G38210TMHMM:TMhelixUniGene:At.30426UniProt:Q8VYG0
Coordinates (TAIR10) chr5:+:15261035..15265376
Molecular Weight (calculated) 75297.90 Da
IEP (calculated) 7.25
GRAVY (calculated) -0.14
Length 686 amino acids
Sequence (TAIR10)
(BLAST)
001: MFSPVLFRFS KPNSFLVLLF FLSYIHFLPC AQSQREPCDT LFRCGDLTAG FPFWGVARPQ PCGHPSLGLH CQKQTNSTSL IISSLMYRVL EVNTTTSTLK
101: LVRQDFSGPF CSASFSGATL TPELFELLPD YKTLSAYYLC NPSLHYPAKF ICPNKGVGSI HQDDLYHNHC GGIFNITVPI GYAPEEGALN VTNLESVLKK
201: GFEVKLSIDE RPCQECKTNG GICAYHVATP VCCKTNSSSE VNCTPMMPSG SSAHAGLSKK GKIGIGFASG FLGATLIGGC LLCIFIRRRK KLATQYTNKG
301: LSTTTPYSSN YTMSNTPTST TISGSNHSLV PSISNLGNGS VYSGIQVFSY EELEEATENF SKELGDGGFG TVYYGTLKDG RAVAVKRLFE RSLKRVEQFK
401: NEIDILKSLK HPNLVILYGC TTRHSRELLL VYEYISNGTL AEHLHGNQAQ SRPICWPARL QIAIETASAL SYLHASGIIH RDVKTTNILL DSNYQVKVAD
501: FGLSRLFPMD QTHISTAPQG TPGYVDPEYY QCYRLNEKSD VYSFGVVLSE LISSKEAVDI TRHRHDINLA NMAISKIQND AVHELADLSL GFARDPSVKK
601: MMSSVAELAF RCLQQERDVR PSMDEIVEVL RVIQKDGISD SKDVVVEIDV NGGDDVGLLK HGVPPPLSPE TDKTTASSSN TTASSF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)