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AT5G37990.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
endoplasmic reticulum 0.564
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G37970.1); Has 880 Blast hits to 866 proteins in 114 species: Archae - 0; Bacteria - 48; Metazoa - 9; Fungi - 5; Plants - 716; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G37990-MONOMEREC:2.1.1.-eggNOG:ENOG410JAHCeggNOG:ENOG4111PH9EMBL:AB012241EMBL:CP002688EnsemblPlants:AT5G37990
EnsemblPlants:AT5G37990.1entrez:833778Gene3D:3.40.50.150GeneID:833778Genevisible:Q9FKC8GO:GO:0008168Gramene:AT5G37990.1
hmmpanther:PTHR31009hmmpanther:PTHR31009:SF14HOGENOM:HOG000238197InParanoid:Q9FKC8InterPro:IPR005299InterPro:IPR029063KEGG:ath:AT5G37990
PaxDb:Q9FKC8Pfam:PF03492Pfam:Q9FKC8PhylomeDB:Q9FKC8PRIDE:Q9FKC8PRO:PR:Q9FKC8ProteinModelPortal:Q9FKC8
Proteomes:UP000006548RefSeq:NP_198615.2SMR:Q9FKC8SUPFAM:SSF53335TAIR:AT5G37990UniGene:At.30447UniProt:Q9FKC8
Coordinates (TAIR10) chr5:-:15133867..15135448
Molecular Weight (calculated) 45647.10 Da
IEP (calculated) 7.34
GRAVY (calculated) -0.23
Length 405 amino acids
Sequence (TAIR10)
(BLAST)
001: MLSAFLGHAS AIAIASPVVS IVGIRRQTYG EMKHVGVVEK QREMPTFPQS FPMNGGDGPH SYIHNSSYQK VAIDGAKEKT SEAILKNLDL ELLNRNSDEN
101: ILRIADFGCS IGPNTFEVVQ NIIDTVKQKN LKENNAYIGA PLEFQVCFND QPNNDFNTLF RTQPISSKQA YLSVGVPGSF HGRVLPKNSL HIGHITYALH
201: WLSTVPQHVC DKKSPALNKS YIQCNNLVEE VTEAYRVQFK KDMGDFLGAR AEELVSGGLM ILSGQCLPDG VPKALTWQGV VIDMIGDCLM DMAKQGITTK
301: EKIELFSLPI YIPHISEFKA EIERNENFSI ETMEKISHPM DYKPLTNDFI TSMFRAILNT IIEEHFGDGV VNELFDRFAK KLNKYPIDFK RCKKYVNYFI
401: VLKRK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)