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AT5G37690.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : SGNH hydrolase-type esterase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G74460.1); Has 3491 Blast hits to 3453 proteins in 233 species: Archae - 0; Bacteria - 356; Metazoa - 0; Fungi - 50; Plants - 3074; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G37690-MONOMERDNASU:833748EC:3.1.1.-eggNOG:COG3240eggNOG:ENOG410IVJ0EMBL:AB018107EMBL:AY085078
EMBL:CP002688EnsemblPlants:AT5G37690EnsemblPlants:AT5G37690.1entrez:833748Gene3D:3.40.50.1110GeneID:833748Genevisible:Q9FHQ1
GO:GO:0005576GO:GO:0016042GO:GO:0016788Gramene:AT5G37690.1hmmpanther:PTHR22835hmmpanther:PTHR22835:SF150HOGENOM:HOG000237649
InParanoid:Q9FHQ1InterPro:IPR001087InterPro:IPR013830KEGG:ath:AT5G37690OMA:CNVDTSIPaxDb:Q9FHQ1Pfam:PF00657
Pfam:Q9FHQ1PhylomeDB:Q9FHQ1PRIDE:Q9FHQ1PRO:PR:Q9FHQ1ProteinModelPortal:Q9FHQ1Proteomes:UP000006548RefSeq:NP_198585.2
STRING:3702.AT5G37690.1SUPFAM:SSF52266TAIR:AT5G37690UniGene:At.22127UniProt:Q9FHQ1
Coordinates (TAIR10) chr5:-:14973610..14976115
Molecular Weight (calculated) 39212.90 Da
IEP (calculated) 8.78
GRAVY (calculated) -0.12
Length 356 amino acids
Sequence (TAIR10)
(BLAST)
001: MMILRLALAI VISTYATAQP ASTSSLVTYI FGDSLTEVGN NNFLQYSLAR ADFPYYGVDF SGGKATGRFT NGRTIGDIIS TKLGILSPPP YLSLSQNDDA
101: FLSGINYASG GAGILNETGI YFIQRLTFND QINCFKKTKE VIRAKIGDGA ANKHVNDAMY FIGLGSNDYV NNFLQPFMAD GQQYTHDEFV ELLTSTLHNQ
201: LTTIYKLGAR KVIFHGLGPL GCIPSQRVKS KTRMCLNRVN EWVLEFNSRT KKLLIDLNKR LPGAKFSFAD TYPAVLDLIN NPTHYGFKIA NTSCCNVDTS
301: VGGLCLPNSK MCKNRQDFVF WDAFHPSDSA NQILADHLFS SLLSSSSPSP APKPRQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)