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AT5G37360.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31975158 (2020): plastid
  • PMID:31932409 (2020): plastid
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:30962257 (2019): plastid
  • PMID:30135097 (2018): plastid
  • PMID:29967049 (2018): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:24872594 (2014): plastid plastid thylakoid
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:23851315 (2013): plastid
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:23390424 (2013): plastid plastid envelope
  • PMID:21531424 (2011): plastid
  • PMID:20061580 (2010): plastid plastid thylakoid
  • PMID:18431481 (2008): plastid plastid thylakoid
  • PMID:15322131 (2004): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IM0EeggNOG:ENOG4111MD7EMBL:AY058859EMBL:AY103300
EMBL:CP002688EnsemblPlants:AT5G37360EnsemblPlants:AT5G37360.1entrez:833710
GeneID:833710GO:GO:0009507GO:GO:0009535GO:GO:0016021
Gramene:AT5G37360.1hmmpanther:PTHR36802hmmpanther:PTHR36802:SF1HOGENOM:HOG000029611
KEGG:ath:AT5G37360OMA:WEMADTSPhylomeDB:Q93Z11Proteomes:UP000006548
RefSeq:NP_198552.1STRING:3702.AT5G37360.1TAIR:AT5G37360TMHMM:TMhelix
UniGene:At.21463UniProt:Q93Z11
Coordinates (TAIR10) chr5:-:14805437..14808113
Molecular Weight (calculated) 33440.90 Da
IEP (calculated) 8.05
GRAVY (calculated) -0.10
Length 309 amino acids
Sequence (TAIR10)
(BLAST)
001: MASCSSSSIS LLQPLHSLSS STLFFSQPSF HFSSSLKPNK SKRHNLSKSL TLRFALTESD STKPLEIEEP SSKSLLLQLS KCFDLPSDYF QQLPNDLRLD
101: LNDAAFDLSN GPVIDECGQE LGETLLNLSR AWEQADTSTS RSLVEKLPEL EILLTDGARS AFGKRLISAG KRFQGMGQYA KGELQKIAKA MITTGGVLSA
201: KTSSVSVSNE SKSGTRMFKF GELQVAVTPE KAYTGAAIAF IYGILSWQIS QGIQSIPENS LQYANDNALL IGKSLRGSLL ALFYASTVLS GFTTAGLILL
301: AKQLSSEKE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)