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AT5G37290.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.995
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ARM repeat superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111JC6eggNOG:KOG4646EMBL:AB017069EMBL:BT025533
EMBL:CP002688EnsemblPlants:AT5G37290EnsemblPlants:AT5G37290.1entrez:833703
ExpressionAtlas:Q9FHT6Gene3D:1.25.10.10GeneID:833703Gramene:AT5G37290.1
hmmpanther:PTHR23315InterPro:IPR000225InterPro:IPR011989InterPro:IPR016024
OMA:FTNNQRQPhylomeDB:Q9FHT6Proteomes:UP000006548RefSeq:NP_198545.1
SMART:SM00185SMR:Q9FHT6SUPFAM:SSF48371TAIR:AT5G37290
UniGene:At.30499UniProt:Q9FHT6
Coordinates (TAIR10) chr5:+:14762730..14764097
Molecular Weight (calculated) 20325.10 Da
IEP (calculated) 4.75
GRAVY (calculated) -0.25
Length 180 amino acids
Sequence (TAIR10)
(BLAST)
001: MFTNNQRQEE RTGKHGTPRL QYLQELVSQF QNATDEETKE RIVANLANFA YDPYNYTILR QLNVLELFVD CITEPNEKLV EFGIGGICNA CAEPKNVATI
101: VEADGIPLII KSLSSPVRNT VNYALGALYY MCDYNRATRE EILRPEVVDL IERYAAAESV SVSFSNLAKA FLDKHVHANT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)