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AT5G36960.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J6GIeggNOG:ENOG410Z77GEMBL:AB016877EMBL:CP002688EMBL:DQ447005EnsemblPlants:AT5G36960EnsemblPlants:AT5G36960.1
entrez:833666GeneID:833666Gramene:AT5G36960.1KEGG:ath:AT5G36960OMA:TQESSNCPhylomeDB:Q9FIV5Proteomes:UP000006548
RefSeq:NP_198512.1TAIR:AT5G36960UniGene:At.55169UniProt:Q9FIV5
Coordinates (TAIR10) chr5:+:14598745..14599729
Molecular Weight (calculated) 15698.80 Da
IEP (calculated) 10.11
GRAVY (calculated) -0.82
Length 137 amino acids
Sequence (TAIR10)
(BLAST)
001: MNSSSSWEMQ LVETAKEELE ILQSQYPNRF AYLKSDLQSF ISHLREDHAP PRLSPSSSVV LTQESSNCNY KQKHKKRKCV MDNLGDQASS STTGKIHKNN
101: NKMGQRVVTK KKNRVEMVLE RAQLCLQKIR DVKASLC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)