AT5G36940.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cationic amino acid transporter 3 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cationic amino acid transporter 3 (CAT3); FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, N-terminal protein myristoylation, transmembrane transport; LOCATED IN: mitochondrion, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 2 (TAIR:AT1G58030.1); Has 38084 Blast hits to 35759 proteins in 2388 species: Archae - 606; Bacteria - 30262; Metazoa - 2092; Fungi - 3272; Plants - 541; Viruses - 0; Other Eukaryotes - 1311 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:14590330..14594137 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 65288.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.87 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.68 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 609 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGCLRSLVRR KQFDSSNGKA ETHHHHQQLA KALTFPHLIA IGVGSTIGAG VYILVGTVAR EHSGPALALS FLIAGISAAL SAFCYAELSS RFPSAGSAYH 101: YSYICIGEGV AWLIGWALIL EYTIGGSTVA RGISPNLAMI FGGEDCLPTI LARHQIPGLD IVVDPCAAVL VFIVTGLCCL GVKESTFAQG IVTTANVFVM 201: IFVIVAGSYL CFKTGWVGYE LPTGYFPYGV DGMLTGSATV FFAYIGFDTV ASMAEEVKNP RRDLPLGIGI SLLLCCLLYM MVSVVIVGLV PYYAMDPDTP 301: ISSAFSSHGI QWAAYLINLG AVMALCSALM GSILPQPRIL MAMARDGLLP SYFSYVNQRT QVPINGTITT GVCAAILAFF MDVSQLAGMV SVGTLVAFTM 401: VAISLLIVRY VVPPDEVPLP SSLQENSSSH VGTSIRSKQP LLGKVDDSVV DKENAPGSWV LNKKNRRKFA GWSIMFTCIG NFLLSYAASS FLLPGLLRYS 501: LCGVGGLFLL VGLIVLICID QDDARHSFGH SGGFICPFVP LLPIVCILIN MYLLVNLGAA TWVRVSVWLF LGVVVYIFYG RRNSSLVNAV YVSTAHLQEI 601: RRTSGHSLA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)