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AT5G36250.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein phosphatase 2C family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G02750.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G36250-MONOMERBioGrid:18873EC:3.1.3.16eggNOG:COG0631eggNOG:KOG0698EMBL:AB026661EMBL:AY061752
EMBL:AY113035EMBL:CP002688EnsemblPlants:AT5G36250EnsemblPlants:AT5G36250.1entrez:833622Gene3D:3.60.40.10GeneID:833622
Genevisible:Q9FG61GO:GO:0004721GO:GO:0004722GO:GO:0005634GO:GO:0005886GO:GO:0006470GO:GO:0046872
Gramene:AT5G36250.1hmmpanther:PTHR13832hmmpanther:PTHR13832:SF286HOGENOM:HOG000233897InParanoid:Q9FG61IntAct:Q9FG61InterPro:IPR001932
InterPro:IPR015655KEGG:ath:AT5G36250MINT:MINT-8312718OMA:GHIVAKRPANTHER:PTHR13832PaxDb:Q9FG61Pfam:PF00481
Pfam:Q9FG61Pfscan:PS51746PhylomeDB:Q9FG61PRIDE:Q9FG61PRO:PR:Q9FG61PROSITE:PS51746ProteinModelPortal:Q9FG61
Proteomes:UP000006548RefSeq:NP_198474.1SMART:SM00332SMR:Q9FG61STRING:3702.AT5G36250.1SUPFAM:SSF81606TAIR:AT5G36250
UniGene:At.27370UniProt:Q9FG61
Coordinates (TAIR10) chr5:+:14282590..14284376
Molecular Weight (calculated) 49316.70 Da
IEP (calculated) 7.50
GRAVY (calculated) -0.40
Length 448 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSCLSSSGG GGSRRSLHGS PHVPGPGRRK RPPKRRPGSC SSSFDNTEEP LLHRIPGRMF LNGSTDTVSL FSQQGKKGPN QDAMIVWENF GSMEDTVFCG
101: VFDGHGPYGH IVAKRVRDLL PLKLGSHLES YVSPEEVLKE ISLNTDDRKI SEDLVHISAN GESRVYNKDY VKDQDMIQML IGSIVKAYRF MDKELKMQVD
201: VDCFCSGTTA VTMVKQGQHL VIGNIGDSRA VLGVRNKDNK LVPFQLTEDL KPDVPAEAER IKRCRGRIFA LRDEPGVARL WLPNHNSPGL AMARAFGDFC
301: LKDFGLISVP DVSYRRLTEK DEFVVLATDG IWDALTNEEV VKIVAKAPTR SSAGRALVEA AVRNWRWKFP TSKVDDCAVV CLFLDSEPNR LSTASFSKEK
401: HINNGVTEPE PDTASSSTPD SGTGSPELNG VNRIDTLVNL PVYVPTKE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)