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AT5G35750.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:21709172 (2011): endoplasmic reticulum
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : histidine kinase 2
Curator
Summary (TAIR10)
Encodes histidine kinase AHK2.
Computational
Description (TAIR10)
histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G35750-MONOMERBioGrid:18805EC:2.7.13.3eggNOG:COG0642eggNOG:KOG0519EMBL:AB011485EMBL:AB046869
EMBL:AK175733EMBL:BT002530EMBL:BT008407EMBL:CP002688EnsemblPlants:AT5G35750EnsemblPlants:AT5G35750.1entrez:833552
Gene3D:1.10.287.130Gene3D:3.30.565.10GeneID:833552Genevisible:Q9C5U2GO:GO:0000155GO:GO:0004673GO:GO:0005789
GO:GO:0005886GO:GO:0006970GO:GO:0007275GO:GO:0009414GO:GO:0009636GO:GO:0009651GO:GO:0009736
GO:GO:0009737GO:GO:0009884GO:GO:0009909GO:GO:0010029GO:GO:0010087GO:GO:0010271GO:GO:0016021
GO:GO:0018106GO:GO:0019900GO:GO:0034757GO:GO:0042802GO:GO:0043424GO:GO:0048509GO:GO:0048831
GO:GO:0070417GO:GO:0071215GO:GO:0080117Gramene:AT5G35750.1hmmpanther:PTHR24423hmmpanther:PTHR24423:SF363HOGENOM:HOG000116474
InParanoid:Q9C5U2IntAct:Q9C5U2InterPro:IPR001789InterPro:IPR003594InterPro:IPR003661InterPro:IPR004358InterPro:IPR005467
InterPro:IPR006189InterPro:IPR011006iPTMnet:Q9C5U2KEGG:ath:AT5G35750KO:K14489ncoils:CoilOMA:GNSMKFT
PaxDb:Q9C5U2Pfam:PF00072Pfam:PF00512Pfam:PF02518Pfam:PF03924Pfam:Q9C5U2Pfscan:PS50109
Pfscan:PS50110Pfscan:PS50839PhylomeDB:Q9C5U2PRIDE:Q9C5U2PRINTS:PR00344PRO:PR:Q9C5U2PROSITE:PS50109
PROSITE:PS50110PROSITE:PS50839ProteinModelPortal:Q9C5U2Proteomes:UP000006548RefSeq:NP_568532.1SMART:SM00387SMART:SM00388
SMART:SM00448SMART:SM01079SMR:Q9C5U2STRING:3702.AT5G35750.1SUPFAM:SSF47384SUPFAM:SSF52172SUPFAM:SSF55874
TAIR:AT5G35750tair10-symbols:AHK2tair10-symbols:HK2TMHMM:TMhelixUniGene:At.23233UniProt:Q9C5U2
Coordinates (TAIR10) chr5:-:13911743..13916337
Molecular Weight (calculated) 131868.00 Da
IEP (calculated) 6.21
GRAVY (calculated) -0.21
Length 1176 amino acids
Sequence (TAIR10)
(BLAST)
0001: MSITCELLNL TSKKAKKSSS SDKKWLKKPL FFLILCGSLV IVLVMFLRLG RSQKEETDSC NGEEKVLYRH QNVTRSEIHD LVSLFSDSDQ VTSFECHKES
0101: SPGMWTNYGI TCSLSVRSDK QETRGLPWNL GLGHSISSTS CMCGNLEPIL QQPENLEEEN HEEGLEQGLS SYLRNAWWCL ILGVLVCHKI YVSHSKARGE
0201: RKEKVHLQEA LAPKKQQQRA QTSSRGAGRW RKNILLLGIL GGVSFSVWWF WDTNEEIIMK RRETLANMCD ERARVLQDQF NVSLNHVHAL SILVSTFHHG
0301: KIPSAIDQRT FEEYTERTNF ERPLTSGVAY ALKVPHSERE KFEKEHGWAI KKMETEDQTV VQDCVPENFD PAPIQDEYAP VIFAQETVSH IVSVDMMSGE
0401: EDRENILRAR ASGKGVLTSP FKLLKSNHLG VVLTFAVYDT SLPPDATEEQ RVEATIGYLG ASYDMPSLVE KLLHQLASKQ TIAVDVYDTT NTSGLIKMYG
0501: SEIGDISEQH ISSLDFGDPS RNHEMHCRFK HKLPIPWTAI TPSILVLVIT FLVGYILYEA INRIATVEED CQKMRELKAR AEAADIAKSQ FLATVSHEIR
0601: TPMNGVLGML KMLMDTDLDA KQMDYAQTAH GSGKDLTSLI NEVLDQAKIE SGRLELENVP FDMRFILDNV SSLLSGKANE KGIELAVYVS SQVPDVVVGD
0701: PSRFRQIITN LVGNSIKFTQ ERGHIFISVH LADEVKEPLT IEDAVLKQRL ALGCSESGET VSGFPAVNAW GSWKNFKTCY STESQNSDQI KLLVTVEDTG
0801: VGIPVDAQGR IFTPFMQADS STSRTYGGTG IGLSISKRLV ELMQGEMGFV SEPGIGSTFS FTGVFGKAET NTSITKLERF DLAIQEFTGL RALVIDNRNI
0901: RAEVTRYELR RLGISADIVS SLRMACTCCI SKLENLAMIL IDKDAWNKEE FSVLDELFTR SKVTFTRVPK IFLLATSATL TERSEMKSTG LIDEVVIKPL
1001: RMSVLICCLQ ETLVNGKKRQ PNRQRRNLGH LLREKQILVV DDNLVNRRVA EGALKKYGAI VTCVESGKAA LAMLKPPHNF DACFMDLQMP EMDGFEATRR
1101: VRELEREINK KIASGEVSAE MFCKFSSWHV PILAMTADVI QATHEECMKC GMDGYVSKPF EEEVLYTAVA RFFEPC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)