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AT5G35660.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Glycine-rich protein family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Glycine-rich protein family; LOCATED IN: endomembrane system; Has 242106 Blast hits to 44248 proteins in 2411 species: Archae - 458; Bacteria - 59126; Metazoa - 88892; Fungi - 17902; Plants - 27548; Viruses - 3419; Other Eukaryotes - 44761 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JWETeggNOG:ENOG4110501EMBL:AB013393EMBL:CP002688EnsemblPlants:AT5G35660EnsemblPlants:AT5G35660.1entrez:3771291
GeneID:3771291Gramene:AT5G35660.1KEGG:ath:AT5G35660OMA:HGGGWKGProteomes:UP000006548RefSeq:NP_001154749.1STRING:3702.AT5G35660.1
TAIR:AT5G35660TMHMM:TMhelixUniGene:At.64256UniGene:At.74628UniProt:Q9FJS3
Coordinates (TAIR10) chr5:-:13852609..13853717
Molecular Weight (calculated) 31630.70 Da
IEP (calculated) 8.05
GRAVY (calculated) -0.88
Length 343 amino acids
Sequence (TAIR10)
(BLAST)
001: MVVKMNTKTF IVWFLLVAAV VVAVAAETSV DDKKQGEKQV EIPTVEGKND AKDSLNKGDV GVEATVEKEE ENNYEIDQHG GGWKGGGGHG GGWKGGGGHG
101: GGWKGGGGHG GGWKGGGGHG GGWKGGGGGR GGGGGGGAEL ETVEIDSASD EDVQNYRGGH GGGWKEGGGQ GGGWKGGGGQ GGGWKGGGGQ GGGWKGGGGQ
201: GGGWKGGGGQ GGGWKGGGGQ GGGWKGGGGR GGGGGGGAEL ENEEINGASE EIQWQGGGGG HGGGWQGGGG GHGGGWQGGG GGHGGGWQGG GGRGGGWKGG
301: GGHGGGWQGG GGRGGGWKGG GGGGGWRGGG GGGGWRGGGG GGG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)