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AT5G35580.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.950
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G05940.1); Has 116021 Blast hits to 114684 proteins in 3463 species: Archae - 93; Bacteria - 13781; Metazoa - 42325; Fungi - 9577; Plants - 32686; Viruses - 372; Other Eukaryotes - 17187 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0515eggNOG:KOG1187EMBL:CP002688EnsemblPlants:AT5G35580EnsemblPlants:AT5G35580.1entrez:833523GeneID:833523
GO:GO:0004672GO:GO:0005524Gramene:AT5G35580.1hmmpanther:PTHR27001hmmpanther:PTHR27001:SF123InParanoid:F4JZW1InterPro:IPR000719
InterPro:IPR001245InterPro:IPR008271InterPro:IPR011009KEGG:ath:AT5G35580OMA:QNFDKPRPaxDb:F4JZW1Pfam:PF07714
Pfscan:PS50011PRIDE:F4JZW1PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:F4JZW1Proteomes:UP000006548RefSeq:NP_198408.2
scanprosite:PS00108SMR:F4JZW1STRING:3702.AT5G35580.1SUPFAM:SSF56112TAIR:AT5G35580UniGene:At.19848UniGene:At.43543
UniProt:F4JZW1
Coordinates (TAIR10) chr5:+:13761980..13763851
Molecular Weight (calculated) 56175.10 Da
IEP (calculated) 9.63
GRAVY (calculated) -0.61
Length 494 amino acids
Sequence (TAIR10)
(BLAST)
001: MVLCFQDPDN IYSPKKTKKD DGERVITKQK SFLGLSILDI SNPSSTTLSE DLSISLAGSD LHVFTQAELR VITQSFSSSN FLGEGGFGPV HKGFIDDKLR
101: PGLKAQPVAV KLLDLDGLQG HREFMTEVMC LGKLKHPNLV KLIGYCCEEA HRLLVYEFMP RGSLESQLFR RCSLPLPWTT RLNIAYEAAK GLQFLHEAEK
201: PIIYRDFKAS NILLDSDYTA KLSDFGLAKD GPQGDDTHVS TRVMGTQGYA APEYIMTGHL TAKSDVYSFG VVLLELLTGR KSVDIARSSR KETLVEWARP
301: MLNDARKLGR IMDPRLEDQY SETGARKAAT LAYQCLRYRP KTRPDISTVV SVLQDIKDYK DDIPIGIFTY TVPTKPRREV KETSLQNFDK PRRETKVTSL
401: QNFDKTRREV KDTSLQNFDK TRREVKETSL QNFDKTRREV KETSLQNFDK PRNVSTTDNH QKFRSPAHTA RNHRITLRNG YNSPMRNEAG GERY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)