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AT5G35170.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:24872594 (2014): plastid plastid stroma
  • PMID:24872594 (2014): plastid plastid envelope
  • PMID:24872594 (2014): plastid plastid thylakoid
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:23667806 (2013): plastid plastid thylakoid
  • PMID:23549413 (2013): plastid
  • PMID:21531424 (2011): plastid
  • PMID:20061580 (2010): plastid plastid thylakoid
  • PMID:18431481 (2008): plastid
  • PMID:15322131 (2004): plastid
  • PMID:12938931 (2003): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : adenylate kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
adenylate kinase family protein; FUNCTIONS IN: nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, phosphotransferase activity, phosphate group as acceptor, adenylate kinase activity, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process, anaerobic respiration, nucleotide metabolic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase, subfamily (InterPro:IPR006259), Domain of unknown function DUF1995 (InterPro:IPR018962), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: adenosine monophosphate kinase (TAIR:AT5G47840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G35170-MONOMERBioCyc:ARA:GQT-2635-MONOMERBRENDA:2.7.4.3EC:2.7.4.3eggNOG:COG0563eggNOG:KOG3078EMBL:AK226238
EMBL:AP000421EMBL:AP002031EMBL:AY070456EMBL:AY133763EMBL:CP002688EnsemblPlants:AT5G35170EnsemblPlants:AT5G35170.1
entrez:833471ExpressionAtlas:Q8VYL1Gene3D:3.40.50.300GeneID:833471Genevisible:Q8VYL1GO:GO:0004017GO:GO:0005524
GO:GO:0009507GO:GO:0009534GO:GO:0009535GO:GO:0009941GO:GO:0046939gramene_pathway:2.7.4.3gramene_pathway:DENOVOPURINE3-PWY
HAMAP:MF_00235hmmpanther:PTHR23359hmmpanther:PTHR23359:SF72HOGENOM:HOG000084512InParanoid:Q8VYL1InterPro:IPR000850InterPro:IPR006259
InterPro:IPR007862InterPro:IPR018962InterPro:IPR027417iPTMnet:Q8VYL1KEGG:00230+2.7.4.3OMA:GFWGFLSPANTHER:PTHR23359
PaxDb:Q8VYL1Pfam:PF00406Pfam:PF09353Pfam:Q8VYL1PhylomeDB:Q8VYL1PRIDE:Q8VYL1PRINTS:PR00094
PRO:PR:Q8VYL1PROSITE:PS00113ProteinModelPortal:Q8VYL1Proteomes:UP000006548RefSeq:NP_198367.2scanprosite:PS00113SMR:Q8VYL1
STRING:3702.AT5G35170.1SUPFAM:SSF52540SUPFAM:SSF57774TAIR:AT5G35170TIGRfam:TIGR01351TIGRFAMs:TIGR01351UniGene:At.28348
unipathway:UPA00588UniProt:Q8VYL1
Coordinates (TAIR10) chr5:+:13419278..13423482
Molecular Weight (calculated) 65742.10 Da
IEP (calculated) 8.96
GRAVY (calculated) -0.31
Length 588 amino acids
Sequence (TAIR10)
(BLAST)
001: MASLSLSSAH FSSTSSSSRS SISTSSLSPS STSLPLLQSP IRRRYRSLRR RLSFSVIPRR TSRSFSTSNS QIRCSINEPL KVMISGAPAS GKGTQCELIV
101: HKFGLVHIST GDLLRAEVSS GTDIGKRAKE FMNSGSLVPD EIVIAMVAGR LSREDAKEHG WLLDGFPRSF AQAQSLDKLN VKPDIFILLD VPDEILIDRC
201: VGRRLDPVTG KIYHIKNYPP ESDEIKARLV TRPDDTEEKV KARLQIYKQN SEAIISAYSD VMVKIDANRP KEVVFEETQT LLSQIQLKRM IKTDKASPVQ
301: DKWRGIPTRL NNIPHSRDIR AYFYEDVLQA TIRSIKDGNT RLRVDINIPE LNPEMDVYRI GTLMELVQAL ALSFADDGKR VKVCVQGSMG EGALAGMPLQ
401: LAGTRKILEY MDWGDDETLG TFVKLGAIGG KEVDEEDDMF ILVAPQNAVG NCIIDDLQAM TTAAGKRPVV LINPRLKDLP ASSGIMQTMG REQRLEYALT
501: FDNCYVFRLL YYLGTQYPIM GALRMSYPYR YELYKRVNEE NGKEKYVLLA TYAERPTPEQ IDDAFSGKSR DQSKKASGIW GFLSSVFS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)