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AT5G33370.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : GDSL-like Lipase/Acylhydrolase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: Li-tolerant lipase 1 (TAIR:AT3G04290.1); Has 3330 Blast hits to 3291 proteins in 163 species: Archae - 0; Bacteria - 218; Metazoa - 0; Fungi - 9; Plants - 3088; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G33370-MONOMERBioCyc:ARA:GQT-1617-MONOMEREC:3.1.1.-eggNOG:COG3240eggNOG:ENOG410IKMVEMBL:AC051625EMBL:AY087366
EMBL:BT004124EMBL:BT004981EMBL:CP002688EnsemblPlants:AT5G33370EnsemblPlants:AT5G33370.1entrez:833315Gene3D:3.40.50.1110
GeneID:833315Genevisible:Q8LB81GO:GO:0005576GO:GO:0016042GO:GO:0016788hmmpanther:PTHR22835hmmpanther:PTHR22835:SF171
HOGENOM:HOG000237649InParanoid:Q8LB81InterPro:IPR001087InterPro:IPR013830KEGG:ath:AT5G33370OMA:GSPEYMHPaxDb:Q8LB81
Pfam:PF00657Pfam:Q8LB81PhylomeDB:Q8LB81PRIDE:Q8LB81PRO:PR:Q8LB81ProteinModelPortal:Q8LB81Proteomes:UP000006548
RefSeq:NP_001078631.1RefSeq:NP_198322.1STRING:3702.AT5G33370.1SUPFAM:SSF52266TAIR:AT5G33370UniGene:At.47577UniProt:Q8LB81
Coordinates (TAIR10) chr5:-:12602773..12604670
Molecular Weight (calculated) 40361.70 Da
IEP (calculated) 6.66
GRAVY (calculated) -0.01
Length 366 amino acids
Sequence (TAIR10)
(BLAST)
001: MTNSVAKLAL LGFCILQVTS LLVPQANARA FLVFGDSLVD NGNNDFLATT ARADNYPYGI DFPTHRPTGR FSNGLNIPDL ISEHLGQESP MPYLSPMLKK
101: DKLLRGANFA SAGIGILNDT GIQFLNIIRI TKQLEYFEQY KVRVSGLVGE EEMNRLVNGA LVLITLGGND FVNNYYLVPF SARSRQFSLP DYVVFVISEY
201: RKVLRKMYDL GARRVLVTGT GPMGCVPAEL AQRSRNGECA TELQRAASLF NPQLIQMITD LNNEVGSSAF IAANTQQMHM DFISDPQAYG FVTSKVACCG
301: QGPYNGIGLC TPLSNLCPNR DLFAFWDPFH PSEKASRIIA QQILNGSPEY MHPMNLSTIL TVDSMT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)