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AT5G29070.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.925
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: zinc ion binding;nucleic acid binding (TAIR:AT4G06479.1); Has 5 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:CP002688EnsemblPlants:AT5G29070EnsemblPlants:AT5G29070.1entrez:833045GeneID:833045GO:GO:0016021Gramene:AT5G29070.1
hmmpanther:PTHR23002hmmpanther:PTHR23002:SF54KEGG:ath:AT5G29070PaxDb:F4KBH3PRIDE:F4KBH3ProteinModelPortal:F4KBH3Proteomes:UP000006548
RefSeq:NP_198259.1TAIR:AT5G29070TMHMM:TMhelixUniGene:At.30700UniProt:F4KBH3
Coordinates (TAIR10) chr5:-:11132175..11133516
Molecular Weight (calculated) 34093.90 Da
IEP (calculated) 10.08
GRAVY (calculated) -0.63
Length 307 amino acids
Sequence (TAIR10)
(BLAST)
001: MCYFTCPRLT GDPRILGKRP YLPPRIHWFL LLLGYLAIHN LTLLSTNLRL LKATKVGKLT DFQIGSFRGF SSGLLVAEAK VLGETCYGRH HQATLDRRPT
101: DWTRCGSDTQ PRPWATQGAT TGPESSPTCR PTGSCSVAAP QPQNFGRSTW SMTWSMVQHT PISAKLRPAR VAHTAYCGHT AGVPRAYYGH TAGTLRANWG
201: ILGQTAGASR AKSYSSVLKT MVRMGKKEEK MGTMGDEMFK GNEPSDDEGN GRWDPMLLEK ELNQKSLMNR LRLDEERSKG KMVDKEGEDE RQKGKRAAEL
301: EMGSEKA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)