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AT5G28770.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : bZIP transcription factor family protein
Curator
Summary (TAIR10)
bZIP protein BZO2H3 mRNA, partial cds
Computational
Description (TAIR10)
BZO2H3; FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616), Basic leucine-zipper, C-terminal (InterPro:IPR020983); BEST Arabidopsis thaliana protein match is: basic leucine zipper 25 (TAIR:AT3G54620.1); Has 2647 Blast hits to 2627 proteins in 198 species: Archae - 0; Bacteria - 8; Metazoa - 224; Fungi - 122; Plants - 2188; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT5G28770EnsemblPlants:AT5G28770.1entrez:832990hmmpanther:PTHR22952hmmpanther:PTHR22952:SF90ncoils:CoilPfam:PF00170
Pfam:PF12498Pfscan:PS50217scanprosite:PS00036SUPFAM:SSF57959tair10-symbols:AtbZIP63tair10-symbols:BZO2H3
Coordinates (TAIR10) chr5:-:10796648..10798147
Molecular Weight (calculated) 33541.20 Da
IEP (calculated) 8.09
GRAVY (calculated) -0.68
Length 307 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKVFSDEEI SGNHHWSVNG MTSLNRSASE WAFNRFIQES SAAADDGEST TACGVSVSSP PNVPVDSEEY RAFLKSKLNL ACAAVAMKRD TSGRSDNGGA
101: NESEQASLAS SKATPMMSSA ITSGSELSGD EEEADGETNM NPTNVKRVKR MLSNRESARR SRRRKQAHLS ELETQVSQLR VENSKLMKGL TDVTQTFNDA
201: SVENRVLKAN IETLRAKVKM AEETVKRLTG FNPMFHNMPQ IVSTVSLPSE TSNSPDTTSS QVTTPEIISS GNKGKALIGC KMNRTASMRR VESLEHLQKR
301: IRSVGDQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)