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AT5G27710.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.588
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 49 Blast hits to 49 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IGZ3eggNOG:ENOG4111H91EMBL:BT011237EMBL:BT012161EMBL:CP002688EnsemblPlants:AT5G27710EnsemblPlants:AT5G27710.1
entrez:832833GeneID:832833Gramene:AT5G27710.1hmmpanther:PTHR35759KEGG:ath:AT5G27710OMA:ANRVFICPhylomeDB:Q6NM16
Proteomes:UP000006548RefSeq:NP_198123.2STRING:3702.AT5G27710.1TAIR:AT5G27710UniGene:At.30791UniProt:Q6NM16
Coordinates (TAIR10) chr5:+:9813069..9815018
Molecular Weight (calculated) 37520.80 Da
IEP (calculated) 6.99
GRAVY (calculated) -0.18
Length 335 amino acids
Sequence (TAIR10)
(BLAST)
001: MVNSYVPLRF TIFISFSIAA ASSFKLHSAS HSPSSFPKAT GDDLLSVLGP PSAASCLNPI VSREIKSCLK FLVPFKSDKP KPEFGRCSPR TGLCSGKIDA
101: VERRSKFEEE NSLIWWPPES VLELARLAVD SGGDPGSIQR TLNPKMIPVP DVERSRKDKC QLTRTPYGRH FIAEEVNSYF EFLFHLIESR GPSVGLNVSL
201: SRYDLFHGHL FLASESGRLG ILFHAKEYPA YDKKVFPYNM GYCQRGSDVK YNDSMNLRNI LWLAPLPSNS SPDWVAPGVL VVLDAHPDGI IYRDLIPDYV
301: KFVRTIYEDD LGTTAVDVNY LNVGAHEPDY QLFMC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)