AT5G27395.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Mitochondrial inner membrane translocase complex, subunit Tim44-related protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Mitochondrial inner membrane translocase complex, subunit Tim44-related protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport; LOCATED IN: mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim44-related (InterPro:IPR007379); Has 319 Blast hits to 319 proteins in 129 species: Archae - 0; Bacteria - 128; Metazoa - 91; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:9671845..9674085 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36497.30 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.54 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.45 | ||||||||||||||||||||||||||||||||
| Length | 313 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSLVRRFQTV RSLLKTAGSR ESSSLPFRNG NEFSLIQIGD DFRFGCWRSY HSSLCHVPEA HGKSAYSRLY EGHSVNTHLL RSTMIAEFLP FMNEKRSATT 101: QVKAPPQLQK TGAVRVSMVS PGFVYEPYAL REKISIWRRC FTRSGWRRTK EDFIRELRSA YAIAKLRKTG YSKNTFYIEA LELYKQINIQ MANGEKKTIR 201: KNVTERMYSA LKNEIKQREA MWDGVYWEMV EPVVKIRTLQ ARLIGIDRTD LKKAFIQLTL EFLTKQKFEA YDAKGNVAAG DKNKEVLVRD IWVFEKSLFH 301: TGAYWRLCGR IKL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)