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AT5G26920.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.971
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cam-binding protein 60-like G
Curator
Summary (TAIR10)
Encodes a calmodulin-binding protein CBP60g (calmodulin binding protein 60-like.g). The calmodulin-binding domain is located near the N-terminus; calmodulin binding is dependent on Ca(2+). Inducible by both bacterial pathogen and MAMP (microbe-associated molecular pattern) treatments. Bacterial growth is enhanced in cbp60g mutants. cbp60g mutants also show defects in salicylic acid (SA) accumulation and SA signaling.
Computational
Description (TAIR10)
Cam-binding protein 60-like G (CBP60G); CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT4G25800.2); Has 271 Blast hits to 271 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 271; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JT80eggNOG:ENOG411083PEMBL:AF007270EMBL:AY095443EMBL:CP002688EnsemblPlants:AT5G26920EnsemblPlants:AT5G26920.1
EnsemblPlants:AT5G26920.2entrez:832750ExpressionAtlas:F4K2R6GeneID:832750Genevisible:F4K2R6GO:GO:0002229GO:GO:0002237
GO:GO:0003700GO:GO:0005516GO:GO:0005634GO:GO:0006351GO:GO:0006355GO:GO:0009617GO:GO:0009620
GO:GO:0009626GO:GO:0009697GO:GO:0009738GO:GO:0009789GO:GO:0009816GO:GO:0010112GO:GO:0010224
GO:GO:0042742GO:GO:0043565GO:GO:0071219GO:GO:0071456GO:GO:0080142GO:GO:1902584hmmpanther:PTHR31713
hmmpanther:PTHR31713:SF11HOGENOM:HOG000237471InParanoid:F4K2R6InterPro:IPR012416KEGG:ath:AT5G26920OMA:LDETECYPaxDb:F4K2R6
Pfam:F4K2R6Pfam:PF07887PhylomeDB:F4K2R6PRIDE:F4K2R6PRO:PR:F4K2R6Proteomes:UP000006548RefSeq:NP_001190408.1
RefSeq:NP_198044.2STRING:3702.AT5G26920.1TAIR:AT5G26920tair10-symbols:CBP60GUniGene:At.30838UniProt:F4K2R6
Coordinates (TAIR10) chr5:+:9475860..9478448
Molecular Weight (calculated) 63071.50 Da
IEP (calculated) 8.48
GRAVY (calculated) -0.47
Length 563 amino acids
Sequence (TAIR10)
(BLAST)
001: MKIRNSPSFH GGSGYSVFRA RNLTFKKVVK KVMRDQSNNQ FMIQMENMIR RIVREEIQRS LQPFLSSSCV SMERSRSETP SSRSRLKLCF INSPPSSIFT
101: GSKIEAEDGS PLVIELVDAT TNTLVSTGPF SSSRVELVPL NADFTEESWT VEGFNRNILT QREGKRPLLT GDLTVMLKNG VGVITGDIAF SDNSSWTRSR
201: KFRLGAKLTG DGAVEARSEA FGCRDQRGES YKKHHPPCPS DEVWRLEKIA KDGVSATRLA ERKILTVKDF RRLYTVNRNE LHNIIGAGVS KKTWNTIVSH
301: AMDCVLDETE CYIYNANTPG VTLLFNSVYE LIRVSFNGND IQNLDQPILD QLKAEAYQNL NRITAVNDRT FVGHPQRSLQ CPQDPGFVVT CSGSQHIDFQ
401: GSLDPSSSSM ALCHKASSST VHPDVLMSFD NSSTARFHID KKFLPTFGNS FKVSELDQVH GKSQTVVTKG CIENNEEDEN AFSYHHHDDM TSSWSPGTHQ
501: AVETMFLTVS ETEEAGMFDV HFANVNLGSP RARWCKVKAA FKVRAAFKEV RRHTTARNPR EGL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)