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AT5G26180.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.809
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G55920.1); Has 8753 Blast hits to 8694 proteins in 2304 species: Archae - 360; Bacteria - 5976; Metazoa - 655; Fungi - 386; Plants - 256; Viruses - 1; Other Eukaryotes - 1119 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0144eggNOG:KOG2360EMBL:AK117681EMBL:BT008590EMBL:CP002688EnsemblPlants:AT5G26180EnsemblPlants:AT5G26180.1
EnsemblPlants:AT5G26180.2entrez:832687Gene3D:3.40.50.150GeneID:832687GO:GO:0008168Gramene:AT5G26180.1Gramene:AT5G26180.2
hmmpanther:PTHR22807hmmpanther:PTHR22807:SF4HOGENOM:HOG000203203InterPro:IPR001678InterPro:IPR023267InterPro:IPR029063KEGG:ath:AT5G26180
KO:K15264OMA:PFPQWHRPfam:PF01189Pfscan:PS51686PhylomeDB:Q8GYE8PRINTS:PR02008PROSITE:PS51686
Proteomes:UP000006548RefSeq:NP_197990.2RefSeq:NP_851079.1SMR:Q8GYE8STRING:3702.AT5G26180.1SUPFAM:SSF53335TAIR:AT5G26180
UniGene:At.30863UniProt:Q8GYE8
Coordinates (TAIR10) chr5:+:9149253..9152595
Molecular Weight (calculated) 63177.90 Da
IEP (calculated) 10.51
GRAVY (calculated) -0.38
Length 567 amino acids
Sequence (TAIR10)
(BLAST)
001: MVARRNKPKA PLVKHRFSGG DSHKPKPPPA TKQPFSGVES HKPKTSPATK QKFSGVESHK PKTPPGKQRF SGAESRKPKT PPATKQKFSS LERSALYARR
101: EAANILRTVL RGDAERRAVA SIKSLVLSPS VRNKRGTFAL VCETLKYLTV IKDVLDIANV LNSKWKRQEP LVFIVCYDIL FGKDTPSIGD AEKFLMRHKE
201: ALLSGLATLL VRKKVDSVDQ LLGSKLTGHL KPRYVRVNTL KMDVDSAVQE LEKHYTVQKD ETVPDLLVLP PGSDLHAHRL VANGRIFLQG KASSMVAAAL
301: QPQAGWEVLD ACSAPGNKTI HLAALMEGQG KIIACELNEE RVKRLEHTIK LSGASNIEVC HGDFLGLNPK DPSFAKIRAI LLDPSCSGSG TITDRLDHLL
401: PSHSEDNNMN YDSMRLHKLA VFQKKALAHA LSFPKVERVV YSTCSIYQIE NEDVVSSVLP LASSLGFKLA TPFPQWQRRG LPVFAGSEHL LRMDPVEDKE
501: GFFIALFVRA NKLDNPKSSE LPDRVCRRRP KERTMQLHPY LCPKMFRAWS GTLHRLKTRF LLSRNGC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)