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AT5G25530.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : DNAJ heat shock family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT2G20560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0484eggNOG:KOG0714EMBL:CP002688EnsemblPlants:AT5G25530
EnsemblPlants:AT5G25530.1entrez:832628Gene3D:1.10.287.110GeneID:832628
GO:GO:0006457Gramene:AT5G25530.1hmmpanther:PTHR24078hmmpanther:PTHR24078:SF266
InParanoid:F4JY55InterPro:IPR001623InterPro:IPR002939InterPro:IPR008971
KEGG:ath:AT5G25530KO:K09510OMA:EPRNKGDPaxDb:F4JY55
Pfam:PF00226Pfam:PF01556Pfscan:PS50076PhylomeDB:F4JY55
PRIDE:F4JY55PRINTS:PR00625PROSITE:PS50076ProteinModelPortal:F4JY55
Proteomes:UP000006548Reactome:R-ATH-3371453Reactome:R-ATH-3371568Reactome:R-ATH-3371571
Reactome:R-ATH-5687128RefSeq:NP_197935.1SMART:SM00271SMR:F4JY55
STRING:3702.AT5G25530.1SUPFAM:SSF46565SUPFAM:SSF49493TAIR:AT5G25530
UniGene:At.54999UniProt:F4JY55
Coordinates (TAIR10) chr5:-:8889665..8890954
Molecular Weight (calculated) 37941.90 Da
IEP (calculated) 8.79
GRAVY (calculated) -0.64
Length 347 amino acids
Sequence (TAIR10)
(BLAST)
001: MGLDYYDILK VNRNATEDDL KKSYRKLAMK WHPDKNPNTK TEAEAKFKQI SEAYEAKYEV MFQVLSDPQK RAVYDQYGEE GLSDMPPPGS TGNNGRAGGF
101: NPRNAEDIFA EFFGSSPFGF GSAGGPGRSM RFQSDGGGGM FGGFGGGNNG SENNIFRTYS EGTPAPKKPP PVESKLPCSL EELYSGSTRK MKISRSIVDA
201: NGRQAQETEI LTIVVKPGWK KGTKIKFPDK GNEQVNQLPA DLVFVIDEKP HDLFTRDGND LITSRRVTLA EAIGGTTVNI NTLDGRNLPV GVAEIVSPGY
301: EFVVPGEGMP IAKEPRNKGD LKIKFDVQFP ARLTTEQKSA LKRVLAG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)