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AT5G25450.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31818904 (2020): mitochondrion
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:23750852 (2013): mitochondrion
  • PMID:22574745 (2012): mitochondrion
  • PMID:22550958 (2012): plastid
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
  • PMID:21841088 (2011): mitochondrion
  • PMID:21472856 (2011): mitochondrion
  • PMID:18189341 (2008): mitochondrion
  • PMID:14671022 (2004): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Cytochrome bd ubiquinol oxidase, 14kDa subunit
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cytochrome bd ubiquinol oxidase, 14kDa subunit; FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity; INVOLVED IN: mitochondrial electron transport, ubiquinol to cytochrome c; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome d ubiquinol oxidase, 14kDa subunit (InterPro:IPR003197); BEST Arabidopsis thaliana protein match is: Cytochrome bd ubiquinol oxidase, 14kDa subunit (TAIR:AT4G32470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioGrid:17894eggNOG:ENOG4111V1GeggNOG:KOG3440EMBL:AC006258
EMBL:AC006601EMBL:CP002688EnsemblPlants:AT5G25450EnsemblPlants:AT5G25450.1
entrez:832619ExpressionAtlas:F4JWS8Gene3D:1.10.1090.10GeneID:832619
Genevisible:F4JWS8GO:GO:0005739GO:GO:0005750GO:GO:0006122
GO:GO:0016020hmmpanther:PTHR12022IntAct:F4JWS8InterPro:IPR003197
OMA:HMKSVSNPANTHER:PTHR12022PaxDb:F4JWS8Pfam:F4JWS8
Pfam:PF02271PhylomeDB:F4JWS8PIRSF:PIRSF000022PRIDE:F4JWS8
PRO:PR:F4JWS8ProDom:PD008153ProteinModelPortal:F4JWS8Proteomes:UP000006548
RefSeq:NP_197927.1SMR:F4JWS8STRING:3702.AT5G25450.1SUPFAM:SSF81524
TAIR:AT5G25450UniGene:At.47519UniProt:F4JWS8
Coordinates (TAIR10) chr5:+:8857036..8857849
Molecular Weight (calculated) 14596.90 Da
IEP (calculated) 10.21
GRAVY (calculated) -0.60
Length 122 amino acids
Sequence (TAIR10)
(BLAST)
001: MASFLQRLVD PRKNFLARMH MKSVSNRLRR YGLRYDDLYD PLYDLDIKEA LNRLPREIVD ARNQRLMRAM DLSMKHEYLP DNLQAVQTPF RSYLQDMLAL
101: VKRERAEREA LGALPLYQRT IP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)