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AT5G25360.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.976
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IY0DeggNOG:ENOG4111Z4CEMBL:AK228420EMBL:BT005777
EMBL:BT006074EMBL:CP002688EnsemblPlants:AT5G25360EnsemblPlants:AT5G25360.1
EnsemblPlants:AT5G25360.2entrez:832608GeneID:832608Gramene:AT5G25360.1
Gramene:AT5G25360.2hmmpanther:PTHR33373hmmpanther:PTHR33373:SF1HOGENOM:HOG000242312
InterPro:IPR025124KEGG:ath:AT5G25360OMA:RHNSQRQPfam:PF13259
PhylomeDB:Q84JY4Proteomes:UP000006548RefSeq:NP_001190393.1RefSeq:NP_197918.1
STRING:3702.AT5G25360.1TAIR:AT5G25360UniGene:At.30915UniProt:Q84JY4
Coordinates (TAIR10) chr5:-:8799934..8802333
Molecular Weight (calculated) 19131.70 Da
IEP (calculated) 7.25
GRAVY (calculated) -0.44
Length 169 amino acids
Sequence (TAIR10)
(BLAST)
001: MHLREIIPSW IYQLFGCMGG CFGCCNKPPL IVAVDEPSKG LRIQGRLVKK PSVSEDFWST STCEMDNSTL QSQRSMSSIS FTNNTSTSAS TSNPTEFVNH
101: GLNLWNQTRQ QWLANGTSQK KAKVREPTIS WNATYESLLG MNKRFSRPIP LPEMVDFLVD VWEQEGLYD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)