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AT5G25120.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
endoplasmic reticulum 0.920
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:19334764 (2009): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ytochrome p450, family 71, subfamily B, polypeptide 11
Curator
Summary (TAIR10)
putative cytochrome P450
Computational
Description (TAIR10)
ytochrome p450, family 71, subfamily B, polypeptide 11 (CYP71B11); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 12 (TAIR:AT5G25130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G25120-MONOMEREC:1.14.-.-eggNOG:COG2124eggNOG:KOG0156EMBL:AC005964EMBL:AK176623EMBL:CP002688
EnsemblPlants:AT5G25120EnsemblPlants:AT5G25120.1entrez:832583Gene3D:1.10.630.10GeneID:832583Genevisible:P58049GO:GO:0005506
GO:GO:0005886GO:GO:0016021GO:GO:0016709GO:GO:0020037GO:GO:0044550GO:GO:0098542Gramene:AT5G25120.1
hmmpanther:PTHR24298hmmpanther:PTHR24298:SF144HOGENOM:HOG000218629InParanoid:P58049InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972
KEGG:ath:AT5G25120KO:K00517ncoils:CoilPaxDb:P58049Pfam:P58049Pfam:PF00067PhylomeDB:P58049
PRIDE:P58049PRINTS:PR00385PRINTS:PR00463PRO:PR:P58049PROSITE:PS00086ProteinModelPortal:P58049Proteomes:UP000006548
RefSeq:NP_197894.1scanprosite:PS00086SMR:P58049STRING:3702.AT5G25120.1SUPFAM:SSF48264TAIR:AT5G25120tair10-symbols:CYP71B11
TMHMM:TMhelixUniGene:At.30928UniProt:P58049
Coordinates (TAIR10) chr5:+:8662851..8664432
Molecular Weight (calculated) 56901.90 Da
IEP (calculated) 8.59
GRAVY (calculated) -0.08
Length 496 amino acids
Sequence (TAIR10)
(BLAST)
001: MSLWYIIVAF VFFSTIIIVR NTRKTKKNLP PGPPRLPIIG NLHQLGSKPH SSMFKLSEKY GPLMALRFGS VSTVVASTPE TVKEVLKTFD AECCSRPYMT
101: YPARLTYNLK DIGFCPYTKY WREVRKMTVV ELYTAKRVQS FQHTRKEEVA SLVDFITQAA SLEKPVNLNT KLMKLSGSVI CRVVFGINLK GSKLENLYEE
201: VIQGTMEVVG SFAAADYFPI IGRIIDRITG LHSKCEKIFK AMDAFFDQSI KHHLEDESIK DDIIDLLLKM ERGEIELGEF QLTRDNTKGI LFNILNAGID
301: TSAQVMTWVM TYLISNPRVM KKAQAEVREV IKNKDDIIEE DIERLEYLKM VVKETFRVLP LVPLLIPREA SKDVKIGGYD IPKKTWIHVN IWAIHRNPNV
401: WKDPEAFIPE RFMDNQIDYK GLNFEFLPFG SGRRMCPGIG MGMALVHLTL INLLYRFDWK LPEGMEVEDV DLEESYGLVC PKKVPLQLIP VLTQWS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)