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AT5G24840.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.448
nucleus 0.388
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : tRNA (guanine-N-7) methyltransferase
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
tRNA (guanine-N-7) methyltransferase; FUNCTIONS IN: tRNA (guanine-N7-)-methyltransferase activity; INVOLVED IN: acetate biosynthetic process from carbon monoxide, methanol oxidation, tRNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA (guanine-N-7) methyltransferase (InterPro:IPR003358); BEST Arabidopsis thaliana protein match is: tRNA (guanine-N-7) methyltransferase (TAIR:AT5G17660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G24840-MONOMEREC:2.1.1.33eggNOG:COG0220eggNOG:KOG3115EMBL:AF069716EMBL:AK118324EMBL:BT006128
EMBL:CP002688EnsemblPlants:AT5G24840EnsemblPlants:AT5G24840.1entrez:832553Gene3D:3.40.50.150GeneID:832553Genevisible:Q8GXB7
GO:GO:0000049GO:GO:0005634GO:GO:0006400GO:GO:0008176GO:GO:0036265Gramene:AT5G24840.1HAMAP:MF_03055
hmmpanther:PTHR23417hmmpanther:PTHR23417:SF16HOGENOM:HOG000260965InParanoid:Q8GXB7InterPro:IPR003358InterPro:IPR025763InterPro:IPR029063
iPTMnet:Q8GXB7KEGG:ath:AT5G24840KO:K03439OMA:IGMEIRVPaxDb:Q8GXB7Pfam:PF02390Pfam:Q8GXB7
Pfscan:PS51625PhylomeDB:Q8GXB7PRIDE:Q8GXB7PRO:PR:Q8GXB7PROSITE:PS51625ProteinModelPortal:Q8GXB7Proteomes:UP000006548
RefSeq:NP_197866.1SMR:Q8GXB7STRING:3702.AT5G24840.1SUPFAM:SSF53335TAIR:AT5G24840TIGRfam:TIGR00091TIGRFAMs:TIGR00091
TMHMM:TMhelixUniGene:At.45620UniGene:At.69724UniPathway:UPA00989UniProt:Q8GXB7
Coordinates (TAIR10) chr5:-:8533897..8534652
Molecular Weight (calculated) 28819.70 Da
IEP (calculated) 8.44
GRAVY (calculated) -0.33
Length 251 amino acids
Sequence (TAIR10)
(BLAST)
001: MDNETKATTF SKSTGLPRKR FYRARAHSNP LSDSHFPIPI SPAHVDYSLH FPKFVEADNK FIKKVEFADI GCGFGGLLIS LATLFPDTLM IGMELRDKVT
101: EYVKERILAL RRTSSEGQYE NISVVRTNSM KYIPNYFEKG QLSKMFFLFP DPHFKEKNHR RRVISTHLLD EYAYVLRAGG IIYTITDVEE LGEWMKSCLE
201: KHPMFESLTQ EELVSDPVVE LLCSATEEGQ KVARNGGQTF RAVFRRIAYV S
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)