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AT5G24800.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : basic leucine zipper 9
Curator
Summary (TAIR10)
Encodes bZIP protein BZO2H2.
Computational
Description (TAIR10)
basic leucine zipper 9 (BZIP9); FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616), Basic leucine-zipper, C-terminal (InterPro:IPR020983); BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G28770.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:17824eggNOG:ENOG410IWNPeggNOG:ENOG410YMIGEMBL:AF069716EMBL:AF310223EMBL:CP002688EnsemblPlants:AT5G24800
EnsemblPlants:AT5G24800.1entrez:832549GeneID:832549Genevisible:Q9FUD3GO:GO:0003700GO:GO:0005634GO:GO:0006351
GO:GO:0042803GO:GO:0043565GO:GO:0046982GO:GO:0071333Gramene:AT5G24800.1hmmpanther:PTHR22952hmmpanther:PTHR22952:SF219
HOGENOM:HOG000240492InParanoid:Q9FUD3IntAct:Q9FUD3InterPro:IPR004827InterPro:IPR020983KEGG:ath:AT5G24800OMA:GTNNRVL
PaxDb:Q9FUD3Pfam:PF00170Pfam:PF12498Pfam:Q9FUD3Pfscan:PS50217PhylomeDB:Q9FUD3PRO:PR:Q9FUD3
PROSITE:PS00036PROSITE:PS50217ProteinModelPortal:Q9FUD3Proteomes:UP000006548RefSeq:NP_568457.1scanprosite:PS00036SMART:SM00338
SMR:Q9FUD3STRING:3702.AT5G24800.1SUPFAM:SSF57959TAIR:AT5G24800tair10-symbols:ATBZIP9tair10-symbols:BZIP9tair10-symbols:BZO2H2
UniGene:At.25540UniGene:At.49059UniProt:Q9FUD3
Coordinates (TAIR10) chr5:+:8515259..8516541
Molecular Weight (calculated) 30410.20 Da
IEP (calculated) 5.39
GRAVY (calculated) -0.67
Length 277 amino acids
Sequence (TAIR10)
(BLAST)
001: MDNHTAKDIG MKRSASELAL QEYLTTSPLD PCFDLMNRDY TCELRDSLLW SEGLFPAGPF RDAQSSICEN LSADSPVSAN KPEVRGGVRR TTSGSSHVNS
101: DDEDAETEAG QSEMTNDPND LKRIRRMNSN RESAKRSRRR KQEYLVDLET QVDSLKGDNS TLYKQLIDAT QQFRSAGTNN RVLKSDVETL RVKVKLAEDL
201: VARGSLTSSL NQLLQTHLSP PSHSISSLHY TGNTSPAITV HSDQSLFPGM TLSGQNSSPG LGNVSSEAVS CVSDIWP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)