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AT5G24660.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : response to low sulfur 2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
RESPONSE TO LOW SULFUR 2 (LSU2); BEST Arabidopsis thaliana protein match is: response to low sulfur 4 (TAIR:AT5G24655.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J513eggNOG:ENOG410ZF0ZEMBL:AB016881EMBL:AK118602EMBL:AY086698EMBL:BT004681EMBL:CP002688
EnsemblPlants:AT5G24660EnsemblPlants:AT5G24660.1entrez:832538GeneID:832538GO:GO:0009658GO:GO:0031347GO:GO:0045893
Gramene:AT5G24660.1hmmpanther:PTHR34283HOGENOM:HOG000238756IntAct:Q9FIR9KEGG:ath:AT5G24660ncoils:CoilOMA:DCHARIL
PhylomeDB:Q9FIR9Proteomes:UP000006548RefSeq:NP_197854.1STRING:3702.AT5G24660.1TAIR:AT5G24660tair10-symbols:LSU2UniGene:At.6923
UniProt:Q9FIR9
Coordinates (TAIR10) chr5:-:8443472..8443756
Molecular Weight (calculated) 10679.60 Da
IEP (calculated) 4.52
GRAVY (calculated) -0.69
Length 94 amino acids
Sequence (TAIR10)
(BLAST)
1: MGKGGNYVTV AASEVDELRR KNGEMEKAVE EMKKEMLQLW RRTQVAEEAE ERLCSQLAEL EAESLDQARD YHSRIIFLMN ELSRLSSDSA SASP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)