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AT5G24310.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ABL interactor-like protein 3
Curator
Summary (TAIR10)
One of four ABI-like proteins.
Computational
Description (TAIR10)
ABL interactor-like protein 3 (ABIL3); BEST Arabidopsis thaliana protein match is: ABL interactor-like protein 2 (TAIR:AT3G49290.2); Has 281 Blast hits to 258 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 102; Fungi - 8; Plants - 157; Viruses - 2; Other Eukaryotes - 10 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IW61eggNOG:ENOG410YAZMEMBL:AB006701EMBL:AK222217EMBL:AY817014EMBL:BT011734EMBL:CP002688
EMBL:DQ132113EMBL:DQ132114EMBL:DQ132115EMBL:DQ132116EMBL:DQ132117EMBL:DQ132118EMBL:DQ132119
EMBL:DQ132120EMBL:DQ132121EMBL:DQ132122EMBL:DQ132123EMBL:DQ132124EMBL:DQ132125EMBL:DQ132126
EMBL:DQ132127EMBL:DQ132128EMBL:DQ132129EnsemblPlants:AT5G24310EnsemblPlants:AT5G24310.1entrez:832498ExpressionAtlas:Q6NMC6
GeneID:832498Genevisible:Q6NMC6GO:GO:0005737GO:GO:0010090GO:GO:0015630GO:GO:0048364hmmpanther:PTHR10460
hmmpanther:PTHR10460:SF10HOGENOM:HOG000237953InParanoid:Q6NMC6IntAct:Q6NMC6InterPro:IPR028457KEGG:ath:AT5G24310OMA:ARGTHHR
PANTHER:PTHR10460PaxDb:Q6NMC6Pfam:Q6NMC6PhylomeDB:Q6NMC6PRIDE:Q6NMC6PRO:PR:Q6NMC6ProteinModelPortal:Q6NMC6
Proteomes:UP000006548RefSeq:NP_197819.2STRING:3702.AT5G24310.1TAIR:AT5G24310tair10-symbols:ABIL3UniGene:At.30967UniProt:Q0WQ89
UniProt:Q6NMC6
Coordinates (TAIR10) chr5:+:8274637..8276325
Molecular Weight (calculated) 36682.50 Da
IEP (calculated) 10.07
GRAVY (calculated) -0.84
Length 321 amino acids
Sequence (TAIR10)
(BLAST)
001: MSAAATMPMP REASNYDEIS MQQSMLFSDS LKDLKNLRTQ LYSAAEYFEL SYTNDEQKQI VVETLKDYAI KALVNTVDHL GSVTYKVNDF VDEKVDEVAG
101: TELRVSCIEQ RLRMCQEYMD HEGRSQQSLV IDTPKFHKRY FLPSGEIKRG GNLAKLKNVE GSFDGEDDWN QFRNAVRATI RETPPPPVRK PILQSPSQRK
201: PQRSATFSFS SIATAPKKEQ DKRAVSPHRF PLLRSGSVAI RPSSISRPTT PSKSRAVTPT PKRYPSEPRR SASVRVAFEK EAQKEPEHQQ QPSKSKRLLK
301: ALLSRRKTKK DDTLYTYLDE Y
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)