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AT5G24080.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.874
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G24080-MONOMERBioGrid:17748EC:2.7.11.1eggNOG:ENOG410II57eggNOG:ENOG410YAJIEMBL:AB009056EMBL:AY056241
EMBL:CP002688EnsemblPlants:AT5G24080EnsemblPlants:AT5G24080.1entrez:832473Gene3D:2.60.120.200Gene3D:2.90.10.10GeneID:832473
Genevisible:Q9FLV4GO:GO:0004674GO:GO:0005516GO:GO:0005524GO:GO:0005886GO:GO:0016021GO:GO:0030246
GO:GO:0048544Gramene:AT5G24080.1hmmpanther:PTHR27002hmmpanther:PTHR27002:SF50HOGENOM:HOG000116550InParanoid:Q9FLV4IntAct:Q9FLV4
InterPro:IPR000719InterPro:IPR000858InterPro:IPR001480InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441
InterPro:IPR024171KEGG:ath:AT5G24080PaxDb:Q9FLV4Pfam:PF00069Pfam:PF00954Pfam:PF01453Pfam:Q9FLV4
Pfscan:PS50011PhylomeDB:Q9FLV4PIRSF:PIRSF000641PRIDE:Q9FLV4PRO:PR:Q9FLV4PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011PROSITE:PS50927ProteinModelPortal:Q9FLV4Proteomes:UP000006548RefSeq:NP_568438.1scanprosite:PS00107scanprosite:PS00108
SMART:SM00108SMART:SM00220SMR:Q9FLV4STRING:3702.AT5G24080.1SUPFAM:SSF51110SUPFAM:SSF56112TAIR:AT5G24080
TMHMM:TMhelixUniGene:At.26352UniProt:Q9FLV4
Coordinates (TAIR10) chr5:-:8139334..8141014
Molecular Weight (calculated) 53075.70 Da
IEP (calculated) 7.42
GRAVY (calculated) -0.23
Length 470 amino acids
Sequence (TAIR10)
(BLAST)
001: MCLSDCKCVA SVYGLDDEKP YCWILKSLNF GGFRDPGSTL FVKTRANESY PSNSNNNDSK SRKSHGLRQK VLVIPIVVGM LVLVALLGML LYYNLDRKRT
101: LKRAAKNSLI LCDSPVSFTY RDLQNCTNNF SQLLGSGGFG TVYKGTVAGE TLVAVKRLDR ALSHGEREFI TEVNTIGSMH HMNLVRLCGY CSEDSHRLLV
201: YEYMINGSLD KWIFSSEQTA NLLDWRTRFE IAVATAQGIA YFHEQCRNRI IHCDIKPENI LLDDNFCPKV SDFGLAKMMG REHSHVVTMI RGTRGYLAPE
301: WVSNRPITVK ADVYSYGMLL LEIVGGRRNL DMSYDAEDFF YPGWAYKELT NGTSLKAVDK RLQGVAEEEE VVKALKVAFW CIQDEVSMRP SMGEVVKLLE
401: GTSDEINLPP MPQTILELIE EGLEDVYRAM RREFNNQLSS LTVNTITTSQ SYRSSSRSHA TCSYSSMSPR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)