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AT5G23910.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ATP binding microtubule motor family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT5G02370.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5059eggNOG:KOG0239eggNOG:KOG0242EMBL:CP002688
EnsemblPlants:AT5G23910EnsemblPlants:AT5G23910.1entrez:832456Gene3D:3.40.850.10
GeneID:832456GO:GO:0003677GO:GO:0003777GO:GO:0005524
GO:GO:0005874GO:GO:0006281GO:GO:0007018Gramene:AT5G23910.1
hmmpanther:PTHR24115hmmpanther:PTHR24115:SF550InParanoid:F4KEC6InterPro:IPR001752
InterPro:IPR010994InterPro:IPR027417InterPro:IPR027640iPTMnet:F4KEC6
KEGG:ath:AT5G23910KO:K10403OMA:NHVVLNSPANTHER:PTHR24115
PaxDb:F4KEC6Pfam:PF00225Pfam:PF12836Pfscan:PS50067
PRIDE:F4KEC6PRINTS:PR00380PROSITE:PS50067ProteinModelPortal:F4KEC6
Proteomes:UP000006548Reactome:R-ATH-983189RefSeq:NP_197779.4SMART:SM00129
SMR:F4KEC6STRING:3702.AT5G23910.1SUPFAM:SSF47781SUPFAM:SSF52540
TAIR:AT5G23910UniGene:At.54963UniProt:F4KEC6
Coordinates (TAIR10) chr5:+:8068452..8072723
Molecular Weight (calculated) 76888.60 Da
IEP (calculated) 8.28
GRAVY (calculated) -0.41
Length 701 amino acids
Sequence (TAIR10)
(BLAST)
001: MTSHGRKVVR VVARVKPSTD LASTKSISVQ KPMGDDSETV TISFGAQFAG SKDSYRLDYC YEENETTGSI LTKEIKPLIS TVFEGKDANV IAHGARNSGK
101: THLIQGNERE LGLAVLTMSE MLSMAEERGD AIFVSVYEVS QETVYDLLDQ EKRVVSVLEG AQGKIQLKGL SQVPVKSLSE FQNLYFGFKK SQKLTSDLPT
201: RSHKGVMIHV TTGNANSGSL GRMNFLDMAG YEDSRKQNSA LGPLEIARVN KSIYALQNVM YALNANESHV PYRESKLTRM LKDCLKGSNI TLLITCLPRE
301: FSQDSFYMLN LASRICLGGN RAITNPTKKK INGLDRSVSL SSAAQRRQTP LTMSAASRKQ TVLRGNVTER KTKINTATSA IKARKLFGEA NDSVKCKNSS
401: KKVEGKAKMV LKKGISTSKV VLSVQASSPK EEICSSITVT DFQSSLVEEE YSLAFSSSTV AMEPGYSNGA SLSSEAIYTT DKETPRKQEE MFAGATHCDD
501: AFVDKAQIVE RDENNSVIEE DLTLVIDEGE NLDKENNSLL ANETASPPLS MRLQELSNNL KSICKFSNQL SVPEKHQTPL TILQAEEASE HSDITAEAAV
601: SIELRTPEKT MPSNIGCSPW KTYSAHSSKL KNSAVGEYLK FINTAGKEDL KKLKGIGDKR AAYIVELREE SPFKTLDDLQ SIGLSAKQVN GLLKKEIGEI
701: F
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)