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AT5G23330.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Nucleotidylyl transferase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: FMN adenylyltransferase activity; INVOLVED IN: riboflavin biosynthetic process; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), FAD synthetase (InterPro:IPR015864); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT5G08340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-2621-MONOMERBRENDA:2.7.7.2EC:2.7.7.2eggNOG:COG0196
eggNOG:ENOG410IHXREMBL:AB007648EMBL:AY085587EMBL:CP002688
EMBL:EU687457EnsemblPlants:AT5G23330EnsemblPlants:AT5G23330.1entrez:832397
Gene3D:3.40.50.620GeneID:832397Genevisible:Q9FMW8GO:GO:0003919
GO:GO:0005524GO:GO:0006747GO:GO:0009231GO:GO:0009507
Gramene:AT5G23330.1gramene_plant_reactome:1119379gramene_plant_reactome:6875870hmmpanther:PTHR12714
hmmpanther:PTHR12714:SF4HOGENOM:HOG000077653InParanoid:Q9FMW8InterPro:IPR014729
InterPro:IPR015864KEGG:00740+2.7.1.26+2.7.7.2KEGG:ath:AT5G23330OMA:HRELAMY
PaxDb:Q9FMW8Pfam:PF06574Pfam:Q9FMW8PhylomeDB:Q9FMW8
PRIDE:Q9FMW8PRO:PR:Q9FMW8ProteinModelPortal:Q9FMW8Proteomes:UP000006548
RefSeq:NP_568429.1SMR:Q9FMW8STRING:3702.AT5G23330.1SUPFAM:SSF52374
TAIR:AT5G23330UniGene:At.31016UniGene:At.70593unipathway:UPA00276
UniPathway:UPA00277UniProt:Q9FMW8
Coordinates (TAIR10) chr5:+:7854194..7855738
Molecular Weight (calculated) 39212.00 Da
IEP (calculated) 9.13
GRAVY (calculated) -0.29
Length 354 amino acids
Sequence (TAIR10)
(BLAST)
001: MLCGGSRASV HLWDHRHPPR LGAKVLRKSS FMLRPCSAIS QQRIKSSFRS HCKTPRKIPA PLDCFSQGDD HPELSAEGLS PVAGGIVALG KFDALHIGHR
101: ELAIQAARIG TPYLLSFVGL AEVLGWKPRA PIVAKCDRKR VLSSWASYCG NIAPVEFEIE FASVRHLNPQ QFVEKLSREL RVCGVVAGEN YRFGYRASGD
201: ASELVRLCKD FGISAYIINS VMDKNQVSVN TEEEDSKSKE RGQVSSTRVR HALAAGDVRY VTELLGRPHR VISRTRTQDL TSKRGRISLQ TSSLLNLPPG
301: NGVYKACSLI VGDKHPISCK VIVDTSNLYI ETEEERFHNS DESQEFQLLG IEFG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)