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AT5G23270.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : sugar transporter 11
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
sugar transporter 11 (STP11); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter 9 (TAIR:AT1G50310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XNQKeggNOG:KOG0254EMBL:AB007648EMBL:AJ001664EMBL:AJ344339EMBL:AK175890EMBL:CP002688
EnsemblPlants:AT5G23270EnsemblPlants:AT5G23270.1entrez:832391GeneID:832391Genevisible:Q9FMX3GO:GO:0005351GO:GO:0005355
GO:GO:0005887GO:GO:0015992GO:GO:0035428GO:GO:0046323GO:GO:1904659Gramene:AT5G23270.1hmmpanther:PTHR23500
hmmpanther:PTHR23500:SF47HOGENOM:HOG000202867InParanoid:Q9FMX3InterPro:IPR003663InterPro:IPR005828InterPro:IPR005829InterPro:IPR020846
KEGG:ath:AT5G23270OMA:CTFIPFFPaxDb:Q9FMX3Pfam:PF00083Pfam:Q9FMX3Pfscan:PS50850PhylomeDB:Q9FMX3
PRIDE:Q9FMX3PRINTS:PR00171PRO:PR:Q9FMX3PROSITE:PS00216PROSITE:PS00217PROSITE:PS50850ProteinModelPortal:Q9FMX3
Proteomes:UP000006548RefSeq:NP_197718.1scanprosite:PS00216scanprosite:PS00217SMR:Q9FMX3STRING:3702.AT5G23270.1SUPFAM:SSF103473
TAIR:AT5G23270tair10-symbols:ATSTP11tair10-symbols:STP11TCDB:2.A.1.1.61TIGRfam:TIGR00879TIGRFAMs:TIGR00879TMHMM:TMhelix
UniGene:At.26444UniProt:Q9FMX3
Coordinates (TAIR10) chr5:+:7839132..7840874
Molecular Weight (calculated) 56727.90 Da
IEP (calculated) 6.36
GRAVY (calculated) 0.47
Length 514 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGGAFIDES GHGGDYEGRV TAFVMITCIV AAMGGLLFGY DIGISGGVIS MEDFLTKFFP DVLRQMQNKR GRETEYCKYD NELLTLFTSS LYLAALFASF
101: LASTITRLFG RKVSMVIGSL AFLSGALLNG LAINLEMLII GRLFLGVGVG FANQSVPLYL SEMAPAKIRG ALNIGFQLAI TIGILAANIV NYVTPKLQNG
201: IGWRLSLGLA GVPAVMMLVG CFFLPDTPNS ILERGNKEKA KEMLQKIRGT MEVEHEFNEL CNACEAAKKV KHPWTNIMQA RYRPQLTFCT FIPFFQQLTG
301: INVIMFYAPV LFKTIGFGND ASLISAVITG LVNVLSTIVS IYSVDKFGRR ALFLQGGFQM IVTQIAVGSM IGWKFGFNGE GNLSGVDADI ILALICLYVA
401: GFAWSWGPLG WLVPSEICPL EIRSAGQSLN VSVNMFFTFF IGQFFLTMLC HMKFGLFYFF AGMVLIMTIF IYFLLPETKG VPIEEMGKVW KEHRYWGKYS
501: NNDDGDDVDD DAYF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)