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AT5G23240.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DNAJ heat shock N-terminal domain-containing protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G42750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1141eggNOG:ENOG410IMMXEMBL:AB007648EMBL:BT030388EMBL:CP002688EnsemblPlants:AT5G23240EnsemblPlants:AT5G23240.1
entrez:832388Gene3D:1.10.287.110GeneID:832388GO:GO:0009507Gramene:AT5G23240.1hmmpanther:PTHR24078HOGENOM:HOG000241120
InterPro:IPR001623KEGG:ath:AT5G23240OMA:APLEFLMPfam:PF00226Pfam:PF13370Pfscan:PS50076PhylomeDB:Q9FMX6
PRINTS:PR00625PROSITE:PS50076Proteomes:UP000006548RefSeq:NP_197715.1SMART:SM00271SMR:Q9FMX6STRING:3702.AT5G23240.1
SUPFAM:SSF46565SUPFAM:SSF54862TAIR:AT5G23240UniGene:At.27634UniGene:At.73054UniProt:Q9FMX6
Coordinates (TAIR10) chr5:-:7826857..7828534
Molecular Weight (calculated) 51766.70 Da
IEP (calculated) 9.24
GRAVY (calculated) -0.42
Length 465 amino acids
Sequence (TAIR10)
(BLAST)
001: MTPAIFSPTT LPPSTATWPC STSQKLITVR SPLKFKCRAT SSSSSITDFD LYDLLGIDRS SDKSQIKSAY RALQKRCHPD IAGDPGHDMA IILNEAYQLL
101: SDPISRQAYD KEQAKLEELR GYTGKPIYSV WCGPETEQRA AFVDEVKCVG CLKCALCAEK TFAIETAYGR ARVVAQWADP ESKIKEAIEA CPVDCISMVE
201: RSDLAPLEFL MSKQPRGNVR IGVGNTVGER VSNVFVDVKK FQERYAKAMS RTTKETSQRE VQISAVEAIR SISNWLYWRS SPYTKPLSPE SNMSLTFTKR
301: KKAVDPDIRK LQDVVAAMKQ ADQSGRTKEK GSAYLLGEDY WSPSNAALPS SGNNNGSKAS SNPQVTRKTF PSEEKPTSRR ENRRQFRIKK FPIGTAIVAV
401: FLVQYQASYR AASELNDHIG GSLALSIVNS PWQQILLAGV TWYFIGAMLL QLVEAVQHKL EDKET
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)