AT5G23190.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 ASURE: plastid What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 86, subfamily B, polypeptide 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
cytochrome P450 CYP86B1, nuclear gene for chloroplast product. CYP86B1 is a very long chain fatty acid hydroxylase specifically involved in polyester monomer biosynthesis during the course of plant development. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 86, subfamily B, polypeptide 1 (CYP86B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: very long-chain fatty acid biosynthetic process, suberin biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G08250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:7803478..7805659 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 64328.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.93 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 559 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNFNSSYNLT FNDVFFSSSS SSDPLVSRRL FLLRDVQILE LLIAIFVFVA IHALRQKKYQ GLPVWPFLGM LPSLAFGLRG NIYEWLSDVL CLQNGTFQFR 101: GPWFSSLNST ITCDPRNVEH LLKNRFSVFP KGSYFRDNLR DLLGDGIFNA DDETWQRQRK TASIEFHSAK FRQLTTQSLF ELVHKRLLPV LETSVKSSSP 201: IDLQDVLLRL TFDNVCMIAF GVDPGCLGPD QPVIPFAKAF EDATEAAVVR FVMPTCVWKF MRYLDIGTEK KLKESIKGVD DFADEVIRTR KKELSLEGET 301: TKRSDLLTVF MGLRDEKGES FSDKFLRDIC VNFILAGRDT SSVALSWFFW LLEKNPEVEE KIMVEMCKIL RQRDDHGNAE KSDYEPVFGP EEIKKMDYLQ 401: AALSEALRLY PSVPVDHKEV QEDDVFPDGT MLKKGDKVIY AIYAMGRMEA IWGKDCLEFR PERWLRDGRF MSESAYKFTA FNGGPRLCLG KDFAYYQMKS 501: TAAAIVYRYK VKVVNGHKVE PKLALTMYMK HGLMVNLINR SVSEIDQYYA KSFDEGYIN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)