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AT5G22410.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : root hair specific 18
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
root hair specific 18 (RHS18); FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root hair, root, synergid; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G17820.1); Has 3762 Blast hits to 3747 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 14; Plants - 3739; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G22410-MONOMERBioGrid:17577EC:1.11.1.7eggNOG:ENOG410IEWYeggNOG:ENOG4110UVGEMBL:AB007651EMBL:CP002688
EMBL:X98803EnsemblPlants:AT5G22410EnsemblPlants:AT5G22410.1entrez:832302ExpressionAtlas:Q9FMR0GeneID:832302Genevisible:Q9FMR0
GO:GO:0004601GO:GO:0005576GO:GO:0006979GO:GO:0009505GO:GO:0009664GO:GO:0020037GO:GO:0042744
GO:GO:0046872GO:GO:0098869Gramene:AT5G22410.1hmmpanther:PTHR31235hmmpanther:PTHR31235:SF70HOGENOM:HOG000237556InParanoid:Q9FMR0
InterPro:IPR000823InterPro:IPR002016InterPro:IPR010255InterPro:IPR019793InterPro:IPR019794KEGG:00940+1.11.1.7KEGG:ath:AT5G22410
KO:K00430MINT:MINT-8062465OMA:MIRLYFHPaxDb:Q9FMR0PeroxiBase:226Pfam:PF00141Pfam:Q9FMR0
Pfscan:PS50873PhylomeDB:Q9FMR0PRIDE:Q9FMR0PRINTS:PR00458PRINTS:PR00461PRO:PR:Q9FMR0PROSITE:PS00435
PROSITE:PS00436PROSITE:PS50873ProteinModelPortal:Q9FMR0Proteomes:UP000006548RefSeq:NP_197633.1scanprosite:PS00435scanprosite:PS00436
SMR:Q9FMR0STRING:3702.AT5G22410.1SUPFAM:SSF48113TAIR:AT5G22410tair10-symbols:RHS18UniGene:At.24060UniProt:Q67ZE7
UniProt:Q9FMR0
Coordinates (TAIR10) chr5:+:7426347..7427722
Molecular Weight (calculated) 36018.50 Da
IEP (calculated) 6.96
GRAVY (calculated) -0.03
Length 331 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVKISTIEV LILSLALLSF GHGCYGQLRL GFYSQNCQNV ENIVSKVVGE AFIKDSSIAP AMIRLYFHDC FSNGCDASLL LDGSNSEKKA SPNLSVRGYE
101: VIDDIKSAVE KECDRVVSCA DIIALATRDL VTLASGGKTR YEIPTGRLDG KISSALLVDL PSPKMTVAET AAKFDQRKLS LNDMVLLLGG HTIGVTHCSF
201: IMDRLYNFQN TQKPDPSMDP KLVEELSAKC PKSSSTDGII SLDQNATSSN TMDVSFYKEI KVSRGVLHID QKLAIDDLTS KMVTDIANGN DFLVRFGQAM
301: VNLGSVRVIS KPKDGEIRRS CRSTCNNPLC V
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)