AT5G22370.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.726 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes QQT1. Required for early embryo development. qqt1 mutant lines are embryo-defective. Participates in the organization of microtubules during cell division. Interacts with QQT2 (encoded by AT4G21800). | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
QUATRE-QUART 1 (QQT1); FUNCTIONS IN: nucleotide binding, ATP binding; INVOLVED IN: embryo development, cell division, embryo development ending in seed dormancy; LOCATED IN: microtubule; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function, ATP binding (InterPro:IPR004130); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G12790.5); Has 1460 Blast hits to 1459 proteins in 284 species: Archae - 123; Bacteria - 7; Metazoa - 415; Fungi - 414; Plants - 155; Viruses - 0; Other Eukaryotes - 346 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:7406587..7408509 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 33567.30 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.51 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.05 | ||||||||||||||||||||||||||||||||||||||||
| Length | 298 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVFGQVVIGP PGSGKTTYCN GMSQFLSLMG RKVAIVNLDP ANDALPYECG VNIEELIKLE DVMSEHSLGP NGGLVYCMEY LEKNIDWLES KLKPLLKDHY 101: ILFDFPGQVE LFFIHDSTKN VLTKLIKSLN LRLTAVQLID SHLCCDPGNY VSSLLLSLST MLHMELPHVN VLSKIDLIGS YGKLAFNLDF YTDVQDLSYL 201: EHHLSQDPRS AKYRKLTKEL CSVIEDYSLV NFTTLDIQDK ESVGDLVKLI DKSNGYIFAG IDASVVEYSK IAIGQTDWDY NRVAAVQEKY MEDEEIQD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)