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AT5G22290.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : NAC domain containing protein 89
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAC domain containing protein 89 (NAC089); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 60 (TAIR:AT3G44290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:17564eggNOG:ENOG410JXQCeggNOG:ENOG41103SCEMBL:AB007651EMBL:AF385685EMBL:AL589883EMBL:AY078006
EMBL:CP002688EnsemblPlants:AT5G22290EnsemblPlants:AT5G22290.1entrez:832289GeneID:832289Genevisible:Q94F58GO:GO:0003677
GO:GO:0003700GO:GO:0005634GO:GO:0005783GO:GO:0006351GO:GO:0009626GO:GO:0009910GO:GO:0034976
GO:GO:0045893Gramene:AT5G22290.1hmmpanther:PTHR31989HOGENOM:HOG000151180InParanoid:Q94F58IntAct:Q94F58InterPro:IPR003441
KEGG:ath:AT5G22290OMA:WEMAQSSPaxDb:Q94F58Pfam:PF02365Pfam:Q94F58Pfscan:PS51005PhylomeDB:Q94F58
PRIDE:Q94F58PRO:PR:Q94F58PROSITE:PS51005ProteinModelPortal:Q94F58Proteomes:UP000006548RefSeq:NP_568414.1SMR:Q94F58
STRING:3702.AT5G22290.1SUPFAM:SSF101941TAIR:AT5G22290tair10-symbols:anac089tair10-symbols:NAC089UniGene:At.7356UniProt:Q94F58
Coordinates (TAIR10) chr5:-:7376044..7377498
Molecular Weight (calculated) 38048.10 Da
IEP (calculated) 5.21
GRAVY (calculated) -0.46
Length 340 amino acids
Sequence (TAIR10)
(BLAST)
001: MDTKAVGVSK DTAASMEAST VFPGFKFSPT DVELISYYLK RKMDGLERSV EVIPDLEIYN FEPWDLPDKS IVKSDSEWFF FCARGKKYPH GSQNRRATKM
101: GYWKATGKER DVKSGSEVIG TKRTLVFHIG RAPKGERTDW IMHEYCVKGV SLDDAMVVCR VRRNKEYNSG TSQKAPKPNS SAEKHAKVQN GATSSGSPSD
201: WDNLVDFYLA GESGEKLLAE MAESSENLQV DNDEDFFADI LRDEIINLDE AVMTGNTPNE VPTLESASME IRVLPLPNMI DKQMSSLLEE RPSQKKKGKD
301: ATESLSSCFV GLYSIKSVNK ARWDVIIGVV ALIAMLFYLE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)