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AT5G22060.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:22318864 (2012): plasma membrane
  • PMID:21166475 (2011): cytosol
  • PMID:19334764 (2009): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DNAJ homologue 2
Curator
Summary (TAIR10)
Co-chaperonin similar to E. coli DnaJ
Computational
Description (TAIR10)
DNAJ homologue 2 (J2); FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to salt stress; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Chaperone DnaJ (InterPro:IPR012724), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ homologue 3 (TAIR:AT3G44110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0484eggNOG:KOG0712EMBL:BT026479EnsemblPlants:AT5G22060EnsemblPlants:AT5G22060.1entrez:832267ExpressionAtlas:Q0V7U1
Gene3D:1.10.287.110Gene3D:2.10.230.10GeneID:832267GO:GO:0005524GO:GO:0006457GO:GO:0009408GO:GO:0046872
Gramene:AT5G22060.1HAMAP:MF_01152hmmpanther:PTHR24078hmmpanther:PTHR24078:SF237InterPro:IPR001305InterPro:IPR001623InterPro:IPR002939
InterPro:IPR008971InterPro:IPR012724InterPro:IPR018253KEGG:ath:AT5G22060KO:K09503ncoils:CoilOMA:EMINARD
PaxDb:Q0V7U1Pfam:P42825Pfam:PF00226Pfam:PF00684Pfam:PF01556Pfscan:PS50076Pfscan:PS51188
PhylomeDB:Q0V7U1PRIDE:Q0V7U1PRINTS:PR00625PROSITE:PS00636PROSITE:PS50076PROSITE:PS51188ProteinModelPortal:Q0V7U1
RefSeq:NP_568412.1scanprosite:PS00636SMART:SM00271SMR:Q0V7U1STRING:3702.AT5G22060.1SUPFAM:SSF46565SUPFAM:SSF49493
SUPFAM:SSF57938TAIR:AT5G22060tair10-symbols:ATJ2tair10-symbols:J2UniGene:At.20861UniGene:At.74800UniProt:P42825
UniProt:Q0V7U1
Coordinates (TAIR10) chr5:-:7303798..7305668
Molecular Weight (calculated) 46441.10 Da
IEP (calculated) 7.13
GRAVY (calculated) -0.77
Length 419 amino acids
Sequence (TAIR10)
(BLAST)
001: MFGRGPSRKS DNTKFYEILG VPKTAAPEDL KKAYKKAAIK NHPDKGGDPE KFKELAQAYE VLSDPEKREI YDQYGEDALK EGMGGGGGGH DPFDIFSSFF
101: GSGGHPFGSH SRGRRQRRGE DVVHPLKVSL EDVYLGTTKK LSLSRKALCS KCNGKGSKSG ASMKCGGCQG SGMKISIRQF GPGMMQQVQH ACNDCKGTGE
201: TINDRDRCPQ CKGEKVVSEK KVLEVNVEKG MQHNQKITFS GQADEAPDTV TGDIVFVIQQ KEHPKFKRKG EDLFVEHTIS LTEALCGFQF VLTHLDKRQL
301: LIKSKPGEVV KPDSYKAISD EGMPIYQRPF MKGKLYIHFT VEFPESLSPD QTKAIEAVLP KPTKAAISDM EIDDCEETTL HDVNIEDEMK RKAQAQREAY
401: DDDEEDHPGG AQRVQCAQQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)