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AT5G21105.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25805245 (2015): extracellular region plant-type cell wall
  • PMID:21433285 (2011): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:16356755 (2006): extracellular region
  • PMID:14595688 (2003): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Plant L-ascorbate oxidase
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Plant L-ascorbate oxidase; FUNCTIONS IN: oxidoreductase activity, L-ascorbate oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117), L-ascorbate oxidase, plants (InterPro:IPR017760); BEST Arabidopsis thaliana protein match is: Plant L-ascorbate oxidase (TAIR:AT5G21100.1); Has 10302 Blast hits to 9343 proteins in 1616 species: Archae - 73; Bacteria - 4566; Metazoa - 590; Fungi - 3309; Plants - 1352; Viruses - 0; Other Eukaryotes - 412 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2132eggNOG:KOG1263EMBL:CP002688EnsemblPlants:AT5G21105EnsemblPlants:AT5G21105.1entrez:832235ExpressionAtlas:F4K6Z5
Gene3D:2.60.40.420GeneID:832235GO:GO:0005507GO:GO:0005576GO:GO:0005618GO:GO:0009506GO:GO:0016491
Gramene:AT5G21105.1gramene_pathway:1.10.3.3gramene_pathway:PWY-2261hmmpanther:PTHR11709hmmpanther:PTHR11709:SF97InParanoid:F4K6Z5InterPro:IPR001117
InterPro:IPR002355InterPro:IPR008972InterPro:IPR011706InterPro:IPR011707InterPro:IPR017760InterPro:IPR033138ncoils:Coil
OMA:DCKEGAVPaxDb:F4K6Z5Pfam:PF00394Pfam:PF07731Pfam:PF07732PRIDE:F4K6Z5PROSITE:PS00079
PROSITE:PS00080ProteinModelPortal:F4K6Z5Proteomes:UP000006548RefSeq:NP_680176.5scanprosite:PS00079scanprosite:PS00080SMR:F4K6Z5
STRING:3702.AT5G21105.1SUPFAM:SSF49503TAIR:AT5G21105TIGRfam:TIGR03388TIGRFAMs:TIGR03388TMHMM:TMhelixUniGene:At.22575
UniProt:F4K6Z5
Coordinates (TAIR10) chr5:+:7172727..7177409
Molecular Weight (calculated) 65842.40 Da
IEP (calculated) 8.41
GRAVY (calculated) -0.28
Length 588 amino acids
Sequence (TAIR10)
(BLAST)
001: MSYDEHTSSS FTYISQMGVW WIVLVVAVLT HTASAAVREY HWEVEYKYWS PDCKEGAVMT VNGEFPGPTI KAFAGDTIVV NLTNKLTTEG LVIHWHGIRQ
101: FGSPWADGAA GVTQCAINPG ETFTYNFTVE KPGTHFYHGH YGMQRSAGLY GSLIVDVAKG KSERLRYDGE FNLLLSDWWH EAIPSQELGL SSKPMRWIGE
201: AQSILINGRG QFNCSLAAQF SNNTSLPMCT FKEGDQCAPQ ILHVEPNKTY RIRLSSTTAL ASLNLAVQGH KLVVVEADGN YITPFTTDDI DIYSGESYSV
301: LLTTDQDPSQ NYYISVGVRG RKPNTTQALT ILNYVTAPAS KLPSSPPPVT PRWDDFERSK NFSKKIFSAM GSPSPPKKYR KRLILLNTQN LIDGYTKWAI
401: NNVSLVTPAT PYLGSVKYNL KLGFNRKSPP RSYRMDYDIM NPPPFPNTTT GNGIYVFPFN VTVDVIIQNA NVLKGIVSEI HPWHLHGHDF WVLGYGDGKF
501: KPGIDEKTYN LKNPPLRNTA ILYPYGWTAI RFVTDNPGVW FFHCHIEPHL HMGMGVVFAE GLNRIGKVPD EALGCGLTKQ FLMNRNRN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)