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AT5G20840.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.751
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phosphoinositide phosphatase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phosphoinositide phosphatase family protein; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT3G43220.1); Has 1872 Blast hits to 1673 proteins in 232 species: Archae - 0; Bacteria - 12; Metazoa - 657; Fungi - 613; Plants - 279; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G20840-MONOMEREC:3.1.3.-eggNOG:COG5329eggNOG:KOG1888EMBL:AF296834EMBL:AY227247EMBL:CP002688
EnsemblPlants:AT5G20840EnsemblPlants:AT5G20840.1entrez:832207GeneID:832207Genevisible:Q7XZU1GO:GO:0005774GO:GO:0007033
GO:GO:0009506GO:GO:0036092GO:GO:0042578Gramene:AT5G20840.1hmmpanther:PTHR11200hmmpanther:PTHR11200:SF122HOGENOM:HOG000168063
InParanoid:Q7XZU1InterPro:IPR002013InterPro:IPR030213iPTMnet:Q7XZU1KEGG:00051+3.1.3.-KEGG:00332+3.1.3.-KEGG:00565+3.1.3.-
KEGG:00600+3.1.3.-KEGG:00730+3.1.3.-KEGG:00740+3.1.3.-KEGG:00760+3.1.3.-KEGG:ath:AT5G20840OMA:MPSTHFFPANTHER:PTHR11200:SF122
PaxDb:Q7XZU1Pfam:PF02383Pfam:Q7XZU1Pfscan:PS50275PhylomeDB:Q7XZU1PRIDE:Q7XZU1PRO:PR:Q7XZU1
PROSITE:PS50275ProteinModelPortal:Q7XZU1Proteomes:UP000006548Reactome:R-ATH-1660514Reactome:R-ATH-1660516Reactome:R-ATH-1660517RefSeq:NP_197584.2
SMR:Q7XZU1STRING:3702.AT5G20840.1TAIR:AT5G20840TMHMM:TMhelixUniGene:At.23018UniProt:Q7XZU1
Coordinates (TAIR10) chr5:-:7061638..7068572
Molecular Weight (calculated) 94052.10 Da
IEP (calculated) 6.91
GRAVY (calculated) -0.47
Length 831 amino acids
Sequence (TAIR10)
(BLAST)
001: MTSSPSVENG GSGSSGSSAL LGCMQQFKLF ETQANFYMIG WNGSGVYRIL KIDRLEASEL NLREDSTAYT KKECYELLKR IHEGNKATGG LKLVTVCYGI
101: IGFIKFLGPY YMLLITERRE IGEICGHIVY EVSKSDMIAL QHSSVLCNTA NLRDENRYKR LLCMVDLTKD FFFSYSYNIM RSFQKNICDH ESGGTLYKKM
201: FVWNEFLTRG TRHHLRNTLW TVALVYGFFK QTILSEAGRN FKLTLIARRS RHNAGTRYLK RGINESGNVA NDVETEQIVS EDVPVDRPMQ ISSVVQNRGS
301: IPLFWSQETS RMKVKPDIVL SKRDLNYEAT RVHFENLVER YGVPIIILNL IKTNERKPRE SILRAEFANA IDFINKDLPE ENRLRFLHWD LHKHFHSKTE
401: NVLALLGKVA ACALMLTGFF YYQLTPAMKL EGYMSLSSSD ADTSPHNSSD DDSRDYDSLE KNCRPSKNVA NGDYDVKPSR LQSGVLRTNC IDCLDRTNVA
501: QYAYGWAALG QQLHALGIRD APTIELDDPL SSTLMGLYER MGDTLAYQYG GSAAHNKVFS ERRGQWRAAT QSQEFLRTLQ RYYNNAYMDA DKQDAINIFL
601: GTFRPEQGSQ AVWELRSDSH SNGRSGEISM GEDEKFLVKR CLSDGNILHE SHTPMSAMSR KNESISHRGF VSSHQVTRTH IISESSPDMP AAGDVTLSRC
701: TPSMPSTHFF GDVQKVQHNG SSSIYLSEQE DMSSVSNFVD IEWLSSSENL CENDHLSRPS ALTIYSTAET SSSENIITEV KQLTPAMRES GSSSRKGKEP
801: VETELSVHTK IRDDFPDSFK QWVAYGEALC H
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)