AT5G20660.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.968 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Zn-dependent exopeptidases superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Zn-dependent exopeptidases superfamily protein; FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M28 (InterPro:IPR007484); BEST Arabidopsis thaliana protein match is: Zn-dependent exopeptidases superfamily protein (TAIR:AT1G67420.2); Has 1349 Blast hits to 1339 proteins in 371 species: Archae - 7; Bacteria - 487; Metazoa - 434; Fungi - 254; Plants - 72; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:6986402..6990947 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 100100.00 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 7.12 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.10 | ||||||||||||||||||||||||||||
| Length | 910 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRKRHPKASD LTEPSSSSKE TDASSDKDAL DKEVQADVKR SGKVWLSVLI LITYSSWFVY NYQLGNLPKP LTAKQAGKRG FSEIEAIKHV KALTQFGPHP 101: VSSDALVHAL EYVLAEVEKV KETAHWEVDV NVDFFESKFG VNRLVGGLFK GKSLVYSDIS HIVLRILPKY ESDAGDNAIL VSSHIDTVFT TGGAGDCSSC 201: VAVMLELARS ASQSAHGFKN SIIFLFNTGE EEGLNGAHSF ITQHPWSSTV RLAIDLEAMG TGGKSSIFQA GPSPWAIENF ALAAKYPSGQ IIGQDLFTSG 301: IIKSATDFQV YKEVAGLSGL DFAFADNTAV YHTKNDKIEL IKPGSLQHLG ENMLAFLLRV ASSSDLPKDK TLQGEERSNP DSAVYFDVLG KYMIVYRQSL 401: ATMLYVSVIM QSILIWVLSV FMGGYPAVVS LILSCLSIIL SWIFSVAFSV AVAFILPWIS SSPVPFASNP WMVVGLFVSP AILGSISGQH VAFIFLRKKS 501: SNRNSNKMQV SPRLRDNLAR LEAERWLFKS GFIQWLVLLA LGTYYKLGST YLALVWLVPP AFAYGLLEAT LSPIRLPKPL KLATLLISLA VPILVSSGSF 601: IQLTGTMIGM LIRFDSNPGV TPEWLGSALI AVAIATFISL SMVYLLAYIH LSGAKKSIVT ALCIITALSL ALVSSGVLPA FTEDTARAVN VVHVVDTSGQ 701: DQVAFISLFS NTPGNLNMEA EQIKEGFRCG RENKIDFVSF EAKYNCVTKK DAEVGWDKHD IPVLRVINDK EREGGRVIAV SMDTGGSSRW TLRIDMDEIE 801: DFTMQVGEEE EEELMIERGE KSSNEEGWHQ IQFAGGKKAP TSFVLKLYKE EEVSDDKKKQ RPLLKLRTDL NRRTPQVQRV LERLPPFCTM FGKSTSPFTL 901: AFLASLPYTK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)