AT5G20380.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : phosphate transporter 4;5 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes an inorganic phosphate transporter (PHT4;5). | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
phosphate transporter 4;5 (PHT4;5); FUNCTIONS IN: inorganic phosphate transmembrane transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: plastid, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G00370.1); Has 43170 Blast hits to 43076 proteins in 2553 species: Archae - 690; Bacteria - 35592; Metazoa - 2424; Fungi - 1396; Plants - 508; Viruses - 0; Other Eukaryotes - 2560 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:6887936..6892358 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 56685.70 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.12 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.32 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 517 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MARLTLRPHN HFFSSPIYAH KQPFLSVYTI FPHHHQNPLI KSRVKCSASG TERVRESKKL PPKDPIEDPK PQLPIPEVLS TETGFEQNWP PWKNIPQRYK 101: LIGATSLAFV ICNMDKVNLS IAIIPMSHQF GWSSSVAGLV QSSFFWGYAL SQLPGGWLSK IFGGRKVLEI GVFTWSFATA LVPLLAGFMP GLIFSRILVG 201: IGEGVSPSAA TDLIARTIPV KERSRAVGFV FGGLSLGSVM GLLLAPPIIE TFNWESVFYL FGLLGVGWFV GFQFLNEEEV SYKGNEISTS HKSENATKEE 301: LGSSLKEIPW KSFFQSPAVW AMIYTHFCGS WGHYTCLSWL PTYFSEALSL NLTEAAWVSI LPPLASIVVT SLASQFADYL ITNGVDTTTV RKICQTIAFV 401: APAICMTLSS VDIGLPPWEI VGILTAGLAL SSFALSGLYC THQDISPEYA SILLGITNTV GAVPGIVGVA LTGFLLDSTH SWTMSLFVPS IFFYLTGTVV 501: WLAFASSEPQ TFRKEDS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)