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AT5G20370.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.991
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : serine-rich protein-related
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
serine-rich protein-related; BEST Arabidopsis thaliana protein match is: serine-rich protein-related (TAIR:AT5G11090.1); Has 168 Blast hits to 168 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 168; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JUNFeggNOG:ENOG41106QDEMBL:CP002688EnsemblPlants:AT5G20370EnsemblPlants:AT5G20370.1entrez:832159GeneID:832159
Gramene:AT5G20370.1hmmpanther:PTHR33132hmmpanther:PTHR33132:SF2HOGENOM:HOG000131649InParanoid:Q3E9A1KEGG:ath:AT5G20370OMA:SFHRRLE
PaxDb:Q3E9A1PhylomeDB:Q3E9A1PRIDE:Q3E9A1Proteomes:UP000006548RefSeq:NP_197537.1TAIR:AT5G20370UniGene:At.65533
UniProt:Q3E9A1
Coordinates (TAIR10) chr5:-:6886931..6887458
Molecular Weight (calculated) 19933.80 Da
IEP (calculated) 12.26
GRAVY (calculated) -0.94
Length 175 amino acids
Sequence (TAIR10)
(BLAST)
001: MAATGRSSRS VLRPLSSSQR LHNNHHHHHR QRSPSPCNKN LNLRLKFYSP GSIPKPSVVT VSSNHQTKRK CLCSPTTHPG SFRCSFHRRL EHEKSKTLAS
101: STVKRNNRGD NTIRVNVGLN LRKLALMNSL AKIGSVEAER FRRSLAANLA KPSSLHSHRR PEFRPRLSRF HEDQD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)